RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C MNN10P50108 393 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C UBC9P50623 157 aaPredicted RBP2.24□□□□□ -2.05
ATG11YPR049C PEX14P53112 341 aa2.24□□□□□ -2.05
ATG11YPR049C RPN4Q03465 531 aa2.24□□□□□ -2.05
ATG11YPR049C SHE9Q04172 456 aa2.24□□□□□ -2.05
ATG11YPR049C YSH1Q06224 779 aaPredicted RBP2.24□□□□□ -2.05
ATG11YPR049C THI73Q07904 523 aa2.24□□□□□ -2.05
ATG11YPR049C NPC2Q12408 173 aa2.24□□□□□ -2.05
ATG11YPR049C MIS1P09440 975 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C SEC12P11655 471 aa2.24□□□□□ -2.05
ATG11YPR049C OM45P16547 393 aa2.24□□□□□ -2.05
ATG11YPR049C VPS3P23643 1011 aa2.24□□□□□ -2.05
ATG11YPR049C PET127P32606 800 aa2.24□□□□□ -2.05
ATG11YPR049C FRE1P32791 686 aa2.24□□□□□ -2.05
ATG11YPR049C TAF14P35189 244 aa2.24□□□□□ -2.05
ATG11YPR049C AVT2P39981 480 aa2.24□□□□□ -2.05
ATG11YPR049C TIF34P40217 347 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C TMA108P40462 946 aa2.24□□□□□ -2.05
ATG11YPR049C MPH1P40562 993 aa2.24□□□□□ -2.05
ATG11YPR049C CTK1Q03957 528 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C GUP2Q08929 609 aa2.24□□□□□ -2.05
ATG11YPR049C SEN1Q00416 2231 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C ERR1P0CX10 437 aa2.24□□□□□ -2.05
ATG11YPR049C ERR2P0CX11 437 aa2.24□□□□□ -2.05
ATG11YPR049C TPM1P17536 199 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C PHO84P25297 587 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C NTH1P32356 751 aa2.24□□□□□ -2.05
ATG11YPR049C PET10P36139 283 aa2.24□□□□□ -2.05
ATG11YPR049C SHE3P38272 425 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C MND2P40577 368 aa2.24□□□□□ -2.05
ATG11YPR049C SNG1P46950 547 aa2.24□□□□□ -2.05
ATG11YPR049C RTT101P47050 842 aa2.24□□□□□ -2.05
ATG11YPR049C UTP14Q04500 899 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C CSM3Q04659 317 aa2.24□□□□□ -2.05
ATG11YPR049C KAP95Q06142 861 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C SLK19Q08581 821 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C TAF10Q12030 206 aa2.24□□□□□ -2.05
ATG11YPR049C HBN1Q96VH4 193 aa2.24□□□□□ -2.05
ATG11YPR049C CDC6P09119 513 aa2.23□□□□□ -2.05
ATG11YPR049C ABZ1P37254 787 aaPredicted RBP2.23□□□□□ -2.05
ATG11YPR049C RLP7P40693 322 aaKnown RBP2.23□□□□□ -2.05
ATG11YPR049C BNA2P47125 453 aa2.23□□□□□ -2.05
ATG11YPR049C GNP1P48813 663 aa2.23□□□□□ -2.05
ATG11YPR049C YKR011CQ02209 353 aa2.23□□□□□ -2.05
ATG11YPR049C GRX8Q05926 109 aa2.23□□□□□ -2.05
ATG11YPR049C YLR012CQ07927 99 aa2.23□□□□□ -2.05
ATG11YPR049C SEC39Q12745 709 aa2.23□□□□□ -2.05
ATG11YPR049C SGE1P33335 543 aa2.23□□□□□ -2.05
ATG11YPR049C AGP2P38090 596 aa2.23□□□□□ -2.05
ATG11YPR049C PRP31P49704 494 aaPredicted RBP2.23□□□□□ -2.05
ATG11YPR049C TEP1P53916 434 aa2.23□□□□□ -2.05
ATG11YPR049C WAR1Q03631 944 aa2.23□□□□□ -2.05
ATG11YPR049C PRM6Q04705 352 aa2.23□□□□□ -2.05
ATG11YPR049C DIS3Q08162 1001 aaKnown RBP2.23□□□□□ -2.05
ATG11YPR049C NBP2Q12163 236 aa2.23□□□□□ -2.05
ATG11YPR049C DMC1P25453 334 aa2.22□□□□□ -2.05
ATG11YPR049C MMS21P38632 267 aa2.22□□□□□ -2.05
ATG11YPR049C SMA1Q02651 245 aa2.22□□□□□ -2.05
ATG11YPR049C HRD3Q05787 833 aa2.22□□□□□ -2.05
ATG11YPR049C NKP2Q06162 153 aa2.22□□□□□ -2.05
ATG11YPR049C APL5Q08951 932 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C SUC2P00724 532 aa2.22□□□□□ -2.05
ATG11YPR049C RPS3P05750 240 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C MKK1P32490 508 aa2.22□□□□□ -2.05
ATG11YPR049C PCM1P38628 557 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C SCD6P45978 349 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
ATG11YPR049C PGA2P53903 129 aa2.22□□□□□ -2.05
ATG11YPR049C TGL2P54857 326 aa2.22□□□□□ -2.05
ATG11YPR049C RHO3Q00245 231 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C RPA49Q01080 415 aaPredicted RBP2.22□□□□□ -2.05
ATG11YPR049C MZM1Q03429 123 aaPredicted RBP2.22□□□□□ -2.05
ATG11YPR049C TRS23Q03784 219 aa2.22□□□□□ -2.05
ATG11YPR049C DCS2Q12123 353 aa2.22□□□□□ -2.05
ATG11YPR049C YPL150WQ12152 901 aa2.22□□□□□ -2.05
ATG11YPR049C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
ATG11YPR049C CYR1P08678 2026 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C GLN4P13188 809 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C VPS1P21576 704 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C KAP104P38217 918 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C YHR033WP38690 423 aa2.22□□□□□ -2.05
ATG11YPR049C YJL070CP40361 888 aa2.22□□□□□ -2.05
ATG11YPR049C VHR1P40522 640 aa2.22□□□□□ -2.05
ATG11YPR049C YFR020WP43600 232 aa2.22□□□□□ -2.05
ATG11YPR049C GUF1P46943 645 aa2.22□□□□□ -2.05
ATG11YPR049C GET3Q12154 354 aaKnown RBP2.22□□□□□ -2.05
ATG11YPR049C YOR338WQ99326 363 aa2.22□□□□□ -2.05
ATG11YPR049C SNF5P18480 905 aa2.21□□□□□ -2.06
ATG11YPR049C RNR1P21524 888 aaKnown RBP2.21□□□□□ -2.06
ATG11YPR049C DGR2P32330 852 aa2.21□□□□□ -2.06
ATG11YPR049C RFT1P38206 574 aaPredicted RBP2.21□□□□□ -2.06
ATG11YPR049C YAL037WP39728 267 aa2.21□□□□□ -2.06
ATG11YPR049C RPH1P39956 796 aa2.21□□□□□ -2.06
ATG11YPR049C GUS1P46655 708 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
ATG11YPR049C NNF2P53253 936 aa2.21□□□□□ -2.06
ATG11YPR049C ARP4P80428 489 aa2.21□□□□□ -2.06
ATG11YPR049C PIR1Q03178 341 aa2.21□□□□□ -2.06
ATG11YPR049C YFT2Q06676 274 aa2.21□□□□□ -2.06
ATG11YPR049C BSC6Q08280 497 aa2.21□□□□□ -2.06
ATG11YPR049C AI5_BETAQ9ZZX0 354 aa2.21□□□□□ -2.06
ATG11YPR049C YHL017WP38745 532 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms