RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SPP41P38904 1435 aa2.44□□□□□ -2.02
VPS16YPL045W MET5P47169 1442 aa2.44□□□□□ -2.02
VPS16YPL045W TRP4P07285 380 aaPredicted RBP2.44□□□□□ -2.02
VPS16YPL045W CAF20P12962 161 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W STE12P13574 688 aa2.44□□□□□ -2.02
VPS16YPL045W SRB5P32585 307 aa2.44□□□□□ -2.02
VPS16YPL045W UBP11P36026 717 aa2.44□□□□□ -2.02
VPS16YPL045W CST26P38226 397 aa2.44□□□□□ -2.02
VPS16YPL045W ARO9P38840 513 aaPredicted RBP2.44□□□□□ -2.02
VPS16YPL045W CCT6P39079 546 aa2.44□□□□□ -2.02
VPS16YPL045W DOT5P40553 215 aa2.44□□□□□ -2.02
VPS16YPL045W SGN1P40561 250 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
VPS16YPL045W BNI5P53890 448 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W DLT1Q04216 342 aa2.44□□□□□ -2.02
VPS16YPL045W GTB1Q04924 702 aa2.44□□□□□ -2.02
VPS16YPL045W MED7Q08278 222 aa2.44□□□□□ -2.02
VPS16YPL045W YPL191CQ08930 360 aa2.44□□□□□ -2.02
VPS16YPL045W SMF3Q12078 473 aaPredicted RBP2.44□□□□□ -2.02
VPS16YPL045W PDH1Q12428 516 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W YJR112W-AQ3E743 109 aa2.44□□□□□ -2.02
VPS16YPL045W YKL033W-AQ86ZR7 236 aa2.44□□□□□ -2.02
VPS16YPL045W ISN1Q99312 450 aa2.44□□□□□ -2.02
VPS16YPL045W DFR1P07807 211 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
VPS16YPL045W CLB3P24870 427 aa2.44□□□□□ -2.02
VPS16YPL045W RFA2P26754 273 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W LST4P34239 828 aa2.44□□□□□ -2.02
VPS16YPL045W PHO11P35842 467 aa2.44□□□□□ -2.02
VPS16YPL045W KES1P35844 434 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W ELF1P36053 145 aa2.44□□□□□ -2.02
VPS16YPL045W VID24P38263 362 aa2.44□□□□□ -2.02
VPS16YPL045W PHO12P38693 467 aa2.44□□□□□ -2.02
VPS16YPL045W GDI1P39958 451 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W ELO3P40319 345 aa2.44□□□□□ -2.02
VPS16YPL045W SEC24P40482 926 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W LCB2P40970 561 aa2.44□□□□□ -2.02
VPS16YPL045W SSU1P41930 458 aa2.44□□□□□ -2.02
VPS16YPL045W YGR066CP53242 292 aa2.44□□□□□ -2.02
VPS16YPL045W ART5P53244 586 aaKnown RBP2.44□□□□□ -2.02
VPS16YPL045W FHN1P53279 174 aa2.44□□□□□ -2.02
VPS16YPL045W OAZ1Q02803 292 aa2.44□□□□□ -2.02
VPS16YPL045W YML037CQ03703 340 aa2.44□□□□□ -2.02
VPS16YPL045W AIM32Q04689 311 aa2.44□□□□□ -2.02
VPS16YPL045W ENB1Q08299 606 aa2.44□□□□□ -2.02
VPS16YPL045W IRC13Q08630 104 aa2.44□□□□□ -2.02
VPS16YPL045W GPN2Q08726 347 aaPredicted RBP2.44□□□□□ -2.02
VPS16YPL045W BUD7Q08754 746 aa2.44□□□□□ -2.02
VPS16YPL045W MLH3Q12083 715 aa2.44□□□□□ -2.02
VPS16YPL045W ULS1Q08562 1619 aa2.43□□□□□ -2.02
VPS16YPL045W SNQ2P32568 1501 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W YBR085C-AO43137 85 aa2.43□□□□□ -2.02
VPS16YPL045W SIR3P06701 978 aa2.43□□□□□ -2.02
VPS16YPL045W PDE1P22434 369 aa2.43□□□□□ -2.02
VPS16YPL045W CLB1P24868 471 aa2.43□□□□□ -2.02
VPS16YPL045W RRP7P25368 297 aaPredicted RBP2.43□□□□□ -2.02
VPS16YPL045W FUB1P25659 250 aa2.43□□□□□ -2.02
VPS16YPL045W BRF1P29056 596 aa2.43□□□□□ -2.02
VPS16YPL045W RFC1P38630 861 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W YHR097CP38809 366 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W REV7P38927 245 aa2.43□□□□□ -2.02
VPS16YPL045W SEC28P40509 296 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W ZIM17P42844 174 aa2.43□□□□□ -2.02
VPS16YPL045W YJL163CP46996 555 aa2.43□□□□□ -2.02
VPS16YPL045W SPT20P50875 604 aa2.43□□□□□ -2.02
VPS16YPL045W OGG1P53397 376 aaPredicted RBP2.43□□□□□ -2.02
VPS16YPL045W SPC98P53540 846 aa2.43□□□□□ -2.02
VPS16YPL045W DAK1P54838 584 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W RPS15Q01855 142 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W PEX25Q02969 394 aa2.43□□□□□ -2.02
VPS16YPL045W CUE5Q08412 411 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W YER175W-AQ8TGU4 54 aa2.43□□□□□ -2.02
VPS16YPL045W RPS13P05756 151 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W MET3P08536 511 aa2.43□□□□□ -2.02
VPS16YPL045W THR1P17423 357 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W YCR051WP25631 222 aa2.43□□□□□ -2.02
VPS16YPL045W URA7P28274 579 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W CDC5P32562 705 aa2.43□□□□□ -2.02
VPS16YPL045W POP2P39008 433 aa2.43□□□□□ -2.02
VPS16YPL045W BUL1P48524 976 aa2.43□□□□□ -2.02
VPS16YPL045W GPI8P49018 411 aa2.43□□□□□ -2.02
VPS16YPL045W YGR079WP53249 370 aa2.43□□□□□ -2.02
VPS16YPL045W DIP5P53388 608 aa2.43□□□□□ -2.02
VPS16YPL045W INA17Q02888 182 aa2.43□□□□□ -2.02
VPS16YPL045W RPC11Q04307 110 aaPredicted RBP2.43□□□□□ -2.02
VPS16YPL045W GYL1Q04322 720 aa2.43□□□□□ -2.02
VPS16YPL045W MRD1Q06106 887 aaKnown RBP2.43□□□□□ -2.02
VPS16YPL045W TRM732Q03496 1420 aa2.43□□□□□ -2.02
VPS16YPL045W YRF1-4O13559 1382 aa2.42□□□□□ -2.02
VPS16YPL045W ARD1P07347 238 aaPredicted RBP2.42□□□□□ -2.02
VPS16YPL045W YSP3P25036 478 aa2.42□□□□□ -2.02
VPS16YPL045W CDC15P27636 974 aa2.42□□□□□ -2.02
VPS16YPL045W PUB1P32588 453 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VPS16YPL045W HIS7P33734 552 aaKnown RBP2.42□□□□□ -2.02
VPS16YPL045W APE3P37302 537 aaKnown RBP2.42□□□□□ -2.02
VPS16YPL045W YPT10P38146 199 aa2.42□□□□□ -2.02
VPS16YPL045W ERC1P38767 581 aa2.42□□□□□ -2.02
VPS16YPL045W THI6P41835 540 aa2.42□□□□□ -2.02
VPS16YPL045W SWP82P43554 623 aa2.42□□□□□ -2.02
VPS16YPL045W BUD27P43573 796 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VPS16YPL045W SNF12P53628 566 aa2.42□□□□□ -2.02
VPS16YPL045W ARX1Q03862 593 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms