RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SAP1P39955 897 aaKnown RBP3.42□□□□□ -1.86
SRL1YOR247W MIT1P40002 666 aa3.42□□□□□ -1.86
SRL1YOR247W PHM8P40025 321 aa3.42□□□□□ -1.86
SRL1YOR247W JHD1P40034 492 aa3.42□□□□□ -1.86
SRL1YOR247W MRX6P48564 524 aa3.42□□□□□ -1.86
SRL1YOR247W GLO1P50107 326 aa3.42□□□□□ -1.86
SRL1YOR247W DSD1P53095 428 aa3.42□□□□□ -1.86
SRL1YOR247W YGR066CP53242 292 aa3.42□□□□□ -1.86
SRL1YOR247W IST1P53843 298 aaPredicted RBP3.42□□□□□ -1.86
SRL1YOR247W INA17Q02888 182 aa3.42□□□□□ -1.86
SRL1YOR247W RAD33Q04231 177 aa3.42□□□□□ -1.86
SRL1YOR247W UTP21Q06078 939 aaPredicted RBP3.42□□□□□ -1.86
SRL1YOR247W CET1O13297 549 aaPredicted RBP3.41□□□□□ -1.86
SRL1YOR247W RPL7AP05737 244 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W STE12P13574 688 aa3.41□□□□□ -1.86
SRL1YOR247W LCB1P25045 558 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W SAT4P25333 603 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W PDB1P32473 366 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W NTR2P36118 322 aaPredicted RBP3.41□□□□□ -1.86
SRL1YOR247W AFG3P39925 761 aa3.41□□□□□ -1.86
SRL1YOR247W RGI2P40188 164 aa3.41□□□□□ -1.86
SRL1YOR247W SEC24P40482 926 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W SPO22P40511 975 aa3.41□□□□□ -1.86
SRL1YOR247W YFL015CP43578 164 aa3.41□□□□□ -1.86
SRL1YOR247W RPN11P43588 306 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W ASN1P49089 572 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W ADE16P54113 591 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W YPL071CQ02864 156 aa3.41□□□□□ -1.86
SRL1YOR247W BUD22Q04347 519 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W SPN1Q06505 410 aaPredicted RBP3.41□□□□□ -1.86
SRL1YOR247W MRH1Q12117 320 aaPredicted RBP3.41□□□□□ -1.86
SRL1YOR247W RPL7BQ12213 244 aaKnown RBP3.41□□□□□ -1.86
SRL1YOR247W YJR112W-AQ3E743 109 aa3.41□□□□□ -1.86
SRL1YOR247W BI2P03873 423 aa3.4□□□□□ -1.87
SRL1YOR247W MET17P06106 444 aa3.4□□□□□ -1.87
SRL1YOR247W SES1P07284 462 aaKnown RBP3.4□□□□□ -1.87
SRL1YOR247W DFR1P07807 211 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SRL1YOR247W PMA2P19657 947 aa3.4□□□□□ -1.87
SRL1YOR247W SPE2P21182 396 aa3.4□□□□□ -1.87
SRL1YOR247W PWP1P21304 576 aaKnown RBP3.4□□□□□ -1.87
SRL1YOR247W YSP3P25036 478 aa3.4□□□□□ -1.87
SRL1YOR247W RRP43P25359 394 aaPredicted RBP3.4□□□□□ -1.87
SRL1YOR247W POL4P25615 582 aa3.4□□□□□ -1.87
SRL1YOR247W PTC6P25646 442 aa3.4□□□□□ -1.87
SRL1YOR247W ORC2P32833 620 aa3.4□□□□□ -1.87
SRL1YOR247W UGP1P32861 499 aaKnown RBP3.4□□□□□ -1.87
SRL1YOR247W PEX5P35056 612 aa3.4□□□□□ -1.87
SRL1YOR247W TPA1P40032 644 aaKnown RBP3.4□□□□□ -1.87
SRL1YOR247W BUR6P40096 142 aa3.4□□□□□ -1.87
SRL1YOR247W STU2P46675 888 aa3.4□□□□□ -1.87
SRL1YOR247W STR3P53101 465 aaKnown RBP3.4□□□□□ -1.87
SRL1YOR247W YGL036WP53185 909 aaPredicted RBP3.4□□□□□ -1.87
SRL1YOR247W GND2P53319 492 aa3.4□□□□□ -1.87
SRL1YOR247W YNR061CP53747 219 aa3.4□□□□□ -1.87
SRL1YOR247W NGL3Q03210 505 aa3.4□□□□□ -1.87
SRL1YOR247W RSM28Q03430 361 aa3.4□□□□□ -1.87
SRL1YOR247W YML037CQ03703 340 aa3.4□□□□□ -1.87
SRL1YOR247W YEH1Q07804 573 aa3.4□□□□□ -1.87
SRL1YOR247W LEA1Q08963 238 aaPredicted RBP3.4□□□□□ -1.87
SRL1YOR247W PCL8Q08966 492 aa3.4□□□□□ -1.87
SRL1YOR247W ADE5,7P07244 802 aaKnown RBP3.39□□□□□ -1.87
SRL1YOR247W HEM1P09950 548 aaPredicted RBP3.39□□□□□ -1.87
SRL1YOR247W KAR3P17119 729 aa3.39□□□□□ -1.87
SRL1YOR247W ADH7P25377 361 aa3.39□□□□□ -1.87
SRL1YOR247W YIH1P25637 258 aa3.39□□□□□ -1.87
SRL1YOR247W DBF4P32325 704 aa3.39□□□□□ -1.87
SRL1YOR247W RPC34P32910 317 aa3.39□□□□□ -1.87
SRL1YOR247W BLI1P35727 113 aa3.39□□□□□ -1.87
SRL1YOR247W BYE1P36106 594 aa3.39□□□□□ -1.87
SRL1YOR247W DIA4P38705 446 aaPredicted RBP3.39□□□□□ -1.87
SRL1YOR247W UIP3P39547 235 aa3.39□□□□□ -1.87
SRL1YOR247W YIL166CP40445 542 aa3.39□□□□□ -1.87
SRL1YOR247W GPD2P41911 440 aaKnown RBP3.39□□□□□ -1.87
SRL1YOR247W TDA10P42938 290 aa3.39□□□□□ -1.87
SRL1YOR247W SWP82P43554 623 aa3.39□□□□□ -1.87
SRL1YOR247W DPB11P47027 764 aaPredicted RBP3.39□□□□□ -1.87
SRL1YOR247W SMC3P47037 1230 aa3.39□□□□□ -1.87
SRL1YOR247W VID30P53076 958 aa3.39□□□□□ -1.87
SRL1YOR247W VPS73P53142 486 aaKnown RBP3.39□□□□□ -1.87
SRL1YOR247W GIS1Q03833 894 aa3.39□□□□□ -1.87
SRL1YOR247W HRD3Q05787 833 aa3.39□□□□□ -1.87
SRL1YOR247W GPN2Q08726 347 aaPredicted RBP3.39□□□□□ -1.87
SRL1YOR247W CIR2Q08822 631 aa3.39□□□□□ -1.87
SRL1YOR247W MRP2P10663 115 aaPredicted RBP3.38□□□□□ -1.87
SRL1YOR247W SRP54P20424 541 aaKnown RBP3.38□□□□□ -1.87
SRL1YOR247W SPO11P23179 398 aa3.38□□□□□ -1.87
SRL1YOR247W ROX1P25042 368 aa3.38□□□□□ -1.87
SRL1YOR247W AAD3P25612 363 aa3.38□□□□□ -1.87
SRL1YOR247W MTH1P35198 433 aa3.38□□□□□ -1.87
SRL1YOR247W UBP11P36026 717 aa3.38□□□□□ -1.87
SRL1YOR247W EXO1P39875 702 aa3.38□□□□□ -1.87
SRL1YOR247W ECM10P39987 644 aa3.38□□□□□ -1.87
SRL1YOR247W YEL020CP39994 560 aa3.38□□□□□ -1.87
SRL1YOR247W AXL1P40851 1208 aa3.38□□□□□ -1.87
SRL1YOR247W ROK1P45818 564 aaPredicted RBP3.38□□□□□ -1.87
SRL1YOR247W MRK1P50873 501 aa3.38□□□□□ -1.87
SRL1YOR247W DIA3P52290 468 aa3.38□□□□□ -1.87
SRL1YOR247W YGR127WP53275 312 aa3.38□□□□□ -1.87
SRL1YOR247W APM1Q00776 475 aaPredicted RBP3.38□□□□□ -1.87
SRL1YOR247W YMR155WQ03795 547 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms