RNA–Protein interactions for RNA: YOR149C

SMP3, Transcript of Alpha 1,2-mannosyltransferase, yeast

Gene SMP3, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP3	YOR149C	MAF1	P41910	395 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	DLD2	P46681	530 aa	Known RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	RFX1	P48743	811 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	STR3	P53101	465 aa	Known RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	TWF1	P53250	332 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SMP3	YOR149C	HOT1	Q03213	719 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	GTB1	Q04924	702 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	DCI1	Q08558	271 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	FMP40	Q08968	688 aa	Predicted RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	CHS5	Q12114	671 aa	Known RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	RPL6B	P05739	176 aa	Known RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	RPL3	P14126	387 aa	Known RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	MVD1	P32377	396 aa	Known RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	SSE1	P32589	693 aa	Known RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	LTV1	P34078	463 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	SEF1	P34228	1148 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	WSS1	P38838	269 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	HXT14	P42833	540 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	CHA4	P43634	648 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	CTK2	P46962	323 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	PET130	P47065	347 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	LYS4	P49367	693 aa	Predicted RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	YGL036W	P53185	909 aa	Predicted RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	YGR111W	P53265	400 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	RPL6A	Q02326	176 aa	Known RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	ARX1	Q03862	593 aa	Known RBP	4.15	□□□□□ -1.74
SMP3	YOR149C	VTA1	Q06263	330 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	RIP-Chip
SMP3	YOR149C	YBR255C-A	Q3E776	120 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	YER175W-A	Q8TGU4	54 aa		4.15	□□□□□ -1.74
SMP3	YOR149C	SOD2	P00447	233 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	ARD1	P07347	238 aa	Predicted RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	PDB1	P32473	366 aa	Known RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	NIP100	P33420	868 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	PMT1	P33775	817 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	GDT1	P38301	280 aa	Predicted RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	MTG2	P38860	518 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	FUN12	P39730	1002 aa	Known RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SMP3	YOR149C	YIR042C	P40586	236 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	FKH2	P41813	862 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	AMA1	P50082	593 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	RIA1	P53893	1110 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YNL144C	P53907	740 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YAP6	Q03935	383 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	ARG7	Q04728	441 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	HPF1	Q05164	967 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	SPH1	Q06160	661 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	HMI1	Q12039	706 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	LPX1	Q12405	387 aa	Known RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	SEC39	Q12745	709 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	GCD1	P09032	578 aa	Predicted RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	APN1	P22936	367 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	DAL80	P26343	269 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	SIP1	P32578	815 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YEL043W	P32618	956 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	RIB7	P33312	244 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	HCS1	P34243	683 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	HEL1	P36113	551 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	MCX1	P38323	520 aa	Predicted RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	SDH8	P38345	138 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YNG2	P38806	282 aa	Known RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	FMO1	P38866	432 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	CCT6	P39079	546 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	BUD16	P39988	312 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	ALG5	P40350	334 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	IRC8	P47046	822 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	MSE1	P48525	536 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	INP52	P50942	1183 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YGR035C	P53222	116 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YGR079W	P53249	370 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	SNO2	P53823	222 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	BOP3	P53958	396 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YAT1	P80235	687 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	RPA49	Q01080	415 aa	Predicted RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	INA17	Q02888	182 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	RSM28	Q03430	361 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	MGR3	Q04472	501 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	DON1	Q05610	365 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	MMR1	Q06324	491 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	RXT3	Q07458	294 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	NOP12	Q08208	459 aa	Known RBP	4.14	□□□□□ -1.75
SMP3	YOR149C	MDY2	Q12285	212 aa		4.14	□□□□□ -1.75
SMP3	YOR149C	YML003W	P0CF16	290 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	PDA1	P16387	420 aa	Known RBP	4.13	□□□□□ -1.75
SMP3	YOR149C	GRR1	P24814	1151 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	RRT2	P38332	387 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	MUP3	P38734	546 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	ETP1	P38748	585 aa	Known RBP	4.13	□□□□□ -1.75
SMP3	YOR149C	UBX6	P47049	396 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	MRPS35	P53292	345 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	SNF12	P53628	566 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	PLB2	Q03674	706 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	SOV1	Q04748	898 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	HEL2	Q05580	639 aa	Known RBP	4.13	□□□□□ -1.75
SMP3	YOR149C	CRN1	Q06440	651 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	TDA6	Q06466	467 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	VPS54	Q12071	889 aa		4.13	□□□□□ -1.75
SMP3	YOR149C	RTC5	Q12108	567 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms