RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W PHO2P07269 559 aa2.85□□□□□ -1.95
PEP12YOR036W YML003WP0CF16 290 aa2.85□□□□□ -1.95
PEP12YOR036W MET8P15807 274 aa2.85□□□□□ -1.95
PEP12YOR036W AMD2P22580 549 aa2.85□□□□□ -1.95
PEP12YOR036W YJU2P28320 278 aaPredicted RBP2.85□□□□□ -1.95
PEP12YOR036W SAC6P32599 642 aaKnown RBP2.85□□□□□ -1.95
PEP12YOR036W JNM1P36224 373 aa2.85□□□□□ -1.95
PEP12YOR036W DED81P38707 554 aaKnown RBP2.85□□□□□ -1.95
PEP12YOR036W PSD1P39006 500 aa2.85□□□□□ -1.95
PEP12YOR036W MAM1P40065 302 aa2.85□□□□□ -1.95
PEP12YOR036W YJR061WP40355 935 aa2.85□□□□□ -1.95
PEP12YOR036W YIL161WP40449 235 aaKnown RBP2.85□□□□□ -1.95
PEP12YOR036W SKP2P42843 763 aa2.85□□□□□ -1.95
PEP12YOR036W REG1Q00816 1014 aa2.85□□□□□ -1.95
PEP12YOR036W YPL071CQ02864 156 aa2.85□□□□□ -1.95
PEP12YOR036W ENT1Q12518 454 aa2.85□□□□□ -1.95
PEP12YOR036W MRP7P12687 371 aa2.84□□□□□ -1.95
PEP12YOR036W YPK1P12688 680 aaKnown RBP2.84□□□□□ -1.95
PEP12YOR036W OLE1P21147 510 aaKnown RBP2.84□□□□□ -1.95
PEP12YOR036W AIM17P23180 465 aaKnown RBP2.84□□□□□ -1.95
PEP12YOR036W ERG8P24521 451 aa2.84□□□□□ -1.95
PEP12YOR036W ESL2P36168 1195 aa2.84□□□□□ -1.95
PEP12YOR036W NOP4P37838 685 aaKnown RBP2.84□□□□□ -1.95
PEP12YOR036W LNP1P38878 278 aa2.84□□□□□ -1.95
PEP12YOR036W UBP7P40453 1071 aa2.84□□□□□ -1.95
PEP12YOR036W AAD10P47182 288 aa2.84□□□□□ -1.95
PEP12YOR036W YNR061CP53747 219 aa2.84□□□□□ -1.95
PEP12YOR036W YSA1Q01976 231 aa2.84□□□□□ -1.95
PEP12YOR036W GIR2Q03768 265 aaPredicted RBP2.84□□□□□ -1.95
PEP12YOR036W HRD3Q05787 833 aa2.84□□□□□ -1.95
PEP12YOR036W STP3Q05937 343 aa2.84□□□□□ -1.95
PEP12YOR036W YDL242WQ07746 117 aa2.84□□□□□ -1.95
PEP12YOR036W PSK2Q08217 1101 aa2.84□□□□□ -1.95
PEP12YOR036W TMA16Q08687 178 aa2.84□□□□□ -1.95
PEP12YOR036W SWT1Q12104 458 aa2.84□□□□□ -1.95
PEP12YOR036W LCB4Q12246 624 aa2.84□□□□□ -1.95
PEP12YOR036W SKM1Q12469 655 aa2.84□□□□□ -1.95
PEP12YOR036W Q0010Q9ZZX9 128 aa2.84□□□□□ -1.95
PEP12YOR036W CDC24P11433 854 aaPredicted RBP2.83□□□□□ -1.96
PEP12YOR036W SGF29P25554 259 aa2.83□□□□□ -1.96
PEP12YOR036W CMK1P27466 446 aaKnown RBP2.83□□□□□ -1.96
PEP12YOR036W HES1P35843 434 aa2.83□□□□□ -1.96
PEP12YOR036W GND1P38720 489 aaKnown RBP2.83□□□□□ -1.96
PEP12YOR036W ERC1P38767 581 aa2.83□□□□□ -1.96
PEP12YOR036W PHM8P40025 321 aa2.83□□□□□ -1.96
PEP12YOR036W LAS21P40367 830 aa2.83□□□□□ -1.96
PEP12YOR036W DJP1P40564 432 aa2.83□□□□□ -1.96
PEP12YOR036W LYS14P40971 790 aa2.83□□□□□ -1.96
PEP12YOR036W IRC6P43615 237 aa2.83□□□□□ -1.96
PEP12YOR036W IRC7P43623 340 aa2.83□□□□□ -1.96
PEP12YOR036W YGR079WP53249 370 aa2.83□□□□□ -1.96
PEP12YOR036W PIL1P53252 339 aaKnown RBP2.83□□□□□ -1.96
PEP12YOR036W YML119WQ03208 357 aa2.83□□□□□ -1.96
PEP12YOR036W NUS1Q12063 375 aa2.83□□□□□ -1.96
PEP12YOR036W BAG7Q12128 409 aa2.83□□□□□ -1.96
PEP12YOR036W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
PEP12YOR036W ERG27Q12452 347 aaKnown RBP2.83□□□□□ -1.96
PEP12YOR036W YCR043CP25361 127 aa2.82□□□□□ -1.96
PEP12YOR036W COQ3P27680 312 aa2.82□□□□□ -1.96
PEP12YOR036W SRB5P32585 307 aa2.82□□□□□ -1.96
PEP12YOR036W GDA1P32621 518 aa2.82□□□□□ -1.96
PEP12YOR036W TFC3P34111 1160 aa2.82□□□□□ -1.96
PEP12YOR036W RPF2P36160 344 aaKnown RBP2.82□□□□□ -1.96
PEP12YOR036W SLZ1P40167 298 aa2.82□□□□□ -1.96
PEP12YOR036W PFK26P40433 827 aaKnown RBP2.82□□□□□ -1.96
PEP12YOR036W YIL152WP40455 235 aa2.82□□□□□ -1.96
PEP12YOR036W MDV1P47025 714 aa2.82□□□□□ -1.96
PEP12YOR036W NPA3P47122 385 aa2.82□□□□□ -1.96
PEP12YOR036W MSY1P48527 492 aa2.82□□□□□ -1.96
PEP12YOR036W DUO1P53168 247 aaKnown RBP2.82□□□□□ -1.96
PEP12YOR036W INN1P53901 409 aa2.82□□□□□ -1.96
PEP12YOR036W MUB1Q03162 620 aa2.82□□□□□ -1.96
PEP12YOR036W ENT4Q07872 247 aa2.82□□□□□ -1.96
PEP12YOR036W CET1O13297 549 aaPredicted RBP2.81□□□□□ -1.96
PEP12YOR036W YSP3P25036 478 aa2.81□□□□□ -1.96
PEP12YOR036W RFA2P26754 273 aaKnown RBP2.81□□□□□ -1.96
PEP12YOR036W NFU1P32860 256 aa2.81□□□□□ -1.96
PEP12YOR036W YOX1P34161 385 aa2.81□□□□□ -1.96
PEP12YOR036W ALY1P36117 915 aa2.81□□□□□ -1.96
PEP12YOR036W RKM3P38222 552 aa2.81□□□□□ -1.96
PEP12YOR036W SDS24P38314 527 aa2.81□□□□□ -1.96
PEP12YOR036W YBR225WP38321 900 aa2.81□□□□□ -1.96
PEP12YOR036W FLC2P39719 783 aa2.81□□□□□ -1.96
PEP12YOR036W YIR016WP40572 265 aa2.81□□□□□ -1.96
PEP12YOR036W RMD8P43620 662 aa2.81□□□□□ -1.96
PEP12YOR036W SGM1P47166 707 aa2.81□□□□□ -1.96
PEP12YOR036W YRB30P53107 440 aaPredicted RBP2.81□□□□□ -1.96
PEP12YOR036W COG2P53271 262 aa2.81□□□□□ -1.96
PEP12YOR036W RBG2P53295 368 aaKnown RBP2.81□□□□□ -1.96
PEP12YOR036W ARE2P53629 642 aaKnown RBP2.81□□□□□ -1.96
PEP12YOR036W TIM10P87108 93 aa2.81□□□□□ -1.96
PEP12YOR036W UBP16Q02863 499 aa2.81□□□□□ -1.96
PEP12YOR036W VIP1Q06685 1146 aaKnown RBP2.81□□□□□ -1.96
PEP12YOR036W RIX7Q07844 837 aaKnown RBP2.81□□□□□ -1.96
PEP12YOR036W NRT1Q08485 598 aa2.81□□□□□ -1.96
PEP12YOR036W YPL191CQ08930 360 aa2.81□□□□□ -1.96
PEP12YOR036W NMD4Q12129 218 aa2.81□□□□□ -1.96
PEP12YOR036W NOP58Q12499 511 aaKnown RBP2.81□□□□□ -1.96
PEP12YOR036W YBR126W-AQ8TGU7 68 aa2.81□□□□□ -1.96
PEP12YOR036W FOB1O13329 566 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms