RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC22	YLR268W	TRS65	P32893	560 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	RRT2	P38332	387 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	SWD1	P39706	426 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	YIR014W	P40570	242 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	ASK10	P48361	1146 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	YGR079W	P53249	370 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	CNM67	P53865	581 aa	Known RBP	2.64	□□□□□ -1.99
SEC22	YLR268W	ATG21	Q02887	496 aa		2.64	□□□□□ -1.99
SEC22	YLR268W	ADH4	P10127	382 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	CAB2	P40506	365 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	PUS4	P48567	403 aa	Known RBP	2.63	□□□□□ -1.99
SEC22	YLR268W	TAN1	P53072	289 aa	Predicted RBP	2.63	□□□□□ -1.99
SEC22	YLR268W	BOR1	P53838	576 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	SMA1	Q02651	245 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	YDR415C	Q04033	374 aa	Predicted RBP	2.63	□□□□□ -1.99
SEC22	YLR268W	YLR455W	Q06188	304 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	BSC1	Q12140	328 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	NYV1	Q12255	253 aa		2.63	□□□□□ -1.99
SEC22	YLR268W	PGI1	P12709	554 aa	Known RBP	2.62	□□□□□ -1.99
SEC22	YLR268W	YEF3	P16521	1044 aa	Known RBP	2.62	□□□□□ -1.99
SEC22	YLR268W	YKL133C	P36066	463 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	DJP1	P40564	432 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	IMA5	P40884	581 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	IAH1	P41734	238 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	MET14	Q02196	202 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	GTB1	Q04924	702 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	MCP2	Q06567	569 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	BAG7	Q12128	409 aa		2.62	□□□□□ -1.99
SEC22	YLR268W	PDR3	P33200	976 aa		2.61	□□□□□ -1.99
SEC22	YLR268W	SPG5	P42933	373 aa		2.61	□□□□□ -1.99
SEC22	YLR268W	MTG1	Q03151	367 aa	Predicted RBP	2.61	□□□□□ -1.99
SEC22	YLR268W	YMR178W	Q03219	274 aa	Known RBP	2.61	□□□□□ -1.99
SEC22	YLR268W	MLC2	Q06580	163 aa		2.61	□□□□□ -1.99
SEC22	YLR268W	ARP7	Q12406	477 aa		2.61	□□□□□ -1.99
SEC22	YLR268W	YER145C-A	A0A023PYF4	145 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	GAL1	P04385	528 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	PTP2	P29461	750 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	RTS1	P38903	757 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	TPM2	P40414	161 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	YPI1	P43587	155 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	DCP2	P53550	970 aa	Known RBP	2.6	□□□□□ -1.99
SEC22	YLR268W	CEG1	Q01159	459 aa	Predicted RBP	2.6	□□□□□ -1.99
SEC22	YLR268W	ATG23	Q06671	453 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	PSR2	Q07949	397 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	ICL2	Q12031	575 aa		2.6	□□□□□ -1.99
SEC22	YLR268W	PET122	P10355	254 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	STE50	P25344	346 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	LSB5	P25369	354 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	MDM31	P38880	579 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	FAF1	P40546	346 aa	Predicted RBP	2.59	□□□□□ -1.99
SEC22	YLR268W	MSY1	P48527	492 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	RTS3	P53289	263 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	ASI1	P54074	624 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	ADE16	P54113	591 aa	Known RBP	2.59	□□□□□ -1.99
SEC22	YLR268W	PFA5	Q03289	374 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	ARP10	Q04549	284 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	RRP6	Q12149	733 aa	Known RBP	2.59	□□□□□ -1.99
SEC22	YLR268W	YLL056C	Q12177	298 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	YOL114C	Q12322	202 aa		2.59	□□□□□ -1.99
SEC22	YLR268W	URK1	P27515	501 aa		2.58	□□□□□ -2
SEC22	YLR268W	RTS2	P40962	232 aa		2.58	□□□□□ -2
SEC22	YLR268W	UBX4	P54730	416 aa		2.58	□□□□□ -2
SEC22	YLR268W	CTL1	Q03220	320 aa	Known RBP	2.58	□□□□□ -2
SEC22	YLR268W	PCT1	P13259	424 aa		2.57	□□□□□ -2
SEC22	YLR268W	POL3	P15436	1097 aa		2.57	□□□□□ -2
SEC22	YLR268W	PHO81	P17442	1178 aa		2.57	□□□□□ -2
SEC22	YLR268W	GLN3	P18494	730 aa		2.57	□□□□□ -2
SEC22	YLR268W	LHS1	P36016	881 aa		2.57	□□□□□ -2
SEC22	YLR268W	STV1	P37296	890 aa		2.57	□□□□□ -2
SEC22	YLR268W	APM3	P38153	483 aa		2.57	□□□□□ -2
SEC22	YLR268W	MRX1	P40050	688 aa		2.57	□□□□□ -2
SEC22	YLR268W	HIS6	P40545	261 aa		2.57	□□□□□ -2
SEC22	YLR268W	DIM1	P41819	318 aa	Known RBP	2.57	□□□□□ -2
SEC22	YLR268W	MAD3	P47074	515 aa		2.57	□□□□□ -2
SEC22	YLR268W	YGL242C	P53066	181 aa		2.57	□□□□□ -2
SEC22	YLR268W	PAP2	P53632	584 aa	Known RBP	2.57	□□□□□ -2
SEC22	YLR268W	TEP1	P53916	434 aa		2.57	□□□□□ -2
SEC22	YLR268W	EKI1	Q03764	534 aa		2.57	□□□□□ -2
SEC22	YLR268W	BRE1	Q07457	700 aa	Known RBP	2.57	□□□□□ -2
SEC22	YLR268W	PIF1	P07271	859 aa		2.56	□□□□□ -2
SEC22	YLR268W	MSS18	P08593	268 aa		2.56	□□□□□ -2
SEC22	YLR268W	MIS1	P09440	975 aa	Known RBP	2.56	□□□□□ -2
SEC22	YLR268W	RPB8	P20436	146 aa		2.56	□□□□□ -2
SEC22	YLR268W	SIR1	P21691	654 aa		2.56	□□□□□ -2
SEC22	YLR268W	RIT1	P23796	513 aa		2.56	□□□□□ -2
SEC22	YLR268W	LOS1	P33418	1100 aa	Predicted RBP	2.56	□□□□□ -2
SEC22	YLR268W	NUP120	P35729	1037 aa		2.56	□□□□□ -2
SEC22	YLR268W	YHL041W	P38730	149 aa		2.56	□□□□□ -2
SEC22	YLR268W	STT3	P39007	718 aa	Known RBP	2.56	□□□□□ -2
SEC22	YLR268W	VPS27	P40343	622 aa	Known RBP	2.56	□□□□□ -2
SEC22	YLR268W	FET5	P43561	622 aa		2.56	□□□□□ -2
SEC22	YLR268W	HIM1	Q06674	414 aa		2.56	□□□□□ -2
SEC22	YLR268W	IWR1	Q07532	353 aa	Predicted RBP	2.56	□□□□□ -2
SEC22	YLR268W	CSR2	Q12734	1121 aa		2.56	□□□□□ -2
SEC22	YLR268W	LRE1	P25579	583 aa	Known RBP	2.55	□□□□□ -2
SEC22	YLR268W	RFA2	P26754	273 aa	Known RBP	2.55	□□□□□ -2
SEC22	YLR268W	FRD1	P32614	470 aa	Known RBP	2.55	□□□□□ -2
SEC22	YLR268W	RRP3	P38712	501 aa	Known RBP	2.55	□□□□□ -2
SEC22	YLR268W	YIL161W	P40449	235 aa	Known RBP	2.55	□□□□□ -2
SEC22	YLR268W	SGF73	P53165	657 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms