RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	COX3	P00420	269 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	RPB2	P08518	1224 aa	Known RBP	10.23	□□□□□ -0.77
SHB17	YKR043C	POL30	P15873	258 aa	Known RBP	10.23	□□□□□ -0.77
SHB17	YKR043C	KAR4	P25583	335 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	MRPL9	P31334	269 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	RPC37	P36121	282 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	MAK5	P38112	773 aa	Predicted RBP	10.23	□□□□□ -0.77
SHB17	YKR043C	LDB7	P38210	180 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	SPP381	P38282	291 aa	Predicted RBP	10.23	□□□□□ -0.77
SHB17	YKR043C	RPN9	Q04062	393 aa	Known RBP	10.23	□□□□□ -0.77
SHB17	YKR043C	CIA1	Q05583	330 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	PNP1	Q05788	311 aa		10.23	□□□□□ -0.77
SHB17	YKR043C	ADE13	Q05911	482 aa	Known RBP	10.23	□□□□□ -0.77
SHB17	YKR043C	RAD1	P06777	1100 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	YKR104W	P0CE69	306 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	SPT15	P13393	240 aa	Known RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	AMD1	P15274	810 aa	Known RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	APA1	P16550	321 aa	Known RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	CIN8	P27895	1000 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	SPS19	P32573	292 aa	Known RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	GDA1	P32621	518 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	STN1	P38960	494 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	MIC19	P43594	170 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	PRP31	P49704	494 aa	Predicted RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	PEX8	P53248	589 aa		10.22	□□□□□ -0.77
SHB17	YKR043C	HBT1	Q07653	1046 aa	Known RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	NOP58	Q12499	511 aa	Known RBP	10.22	□□□□□ -0.77
SHB17	YKR043C	ILS1	P09436	1072 aa	Known RBP	10.21	□□□□□ -0.77
SHB17	YKR043C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	10.21	□□□□□ -0.77	not detected
SHB17	YKR043C	ATP12	P22135	325 aa		10.21	□□□□□ -0.77
SHB17	YKR043C	BEM1	P29366	551 aa		10.21	□□□□□ -0.77
SHB17	YKR043C	IML3	P38265	245 aa		10.21	□□□□□ -0.77
SHB17	YKR043C	ALG8	P40351	577 aa		10.21	□□□□□ -0.77
SHB17	YKR043C	TFB2	Q02939	513 aa		10.21	□□□□□ -0.77
SHB17	YKR043C	SMF3	Q12078	473 aa	Predicted RBP	10.21	□□□□□ -0.77
SHB17	YKR043C	ADH4	P10127	382 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	EPT1	P22140	391 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	RRP3	P38712	501 aa	Known RBP	10.2	□□□□□ -0.78
SHB17	YKR043C	DBP8	P38719	431 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	IRR1	P40541	1150 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	DSN1	P40568	576 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	GTS1	P40956	396 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	YJR039W	P47107	1121 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	SHR3	Q02774	210 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	CDC123	Q05791	360 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	NUT2	Q06213	157 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	HRK1	Q08732	759 aa	Known RBP	10.2	□□□□□ -0.78
SHB17	YKR043C	BUD7	Q08754	746 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	SRO7	Q12038	1033 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	PIN2	Q12057	282 aa		10.2	□□□□□ -0.78
SHB17	YKR043C	INH1	P01097	85 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	GPA2	P10823	449 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	GLN4	P13188	809 aa	Known RBP	10.19	□□□□□ -0.78
SHB17	YKR043C	NSP1	P14907	823 aa	Known RBP	10.19	□□□□□ -0.78
SHB17	YKR043C	AMS1	P22855	1083 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	RFA2	P26754	273 aa	Known RBP	10.19	□□□□□ -0.78
SHB17	YKR043C	GUT2	P32191	649 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	UTH1	P36135	365 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	YSW1	P38280	609 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	YHI9	P38765	294 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	PCL5	P38794	229 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	CYC2	P38909	366 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	ACO2	P39533	789 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	IME4	P41833	600 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	CCT8	P47079	568 aa	Known RBP	10.19	□□□□□ -0.78
SHB17	YKR043C	YGL108C	P53139	140 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	SLT2	Q00772	484 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	YDR109C	Q04585	715 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	ARG7	Q04728	441 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	YFT2	Q06676	274 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	YDL129W	Q07555	291 aa		10.19	□□□□□ -0.78
SHB17	YKR043C	SPS1	P08458	490 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	RPL40A	P0CH08	128 aa	Known RBP	10.18	□□□□□ -0.78
SHB17	YKR043C	RPL40B	P0CH09	128 aa	Known RBP	10.18	□□□□□ -0.78
SHB17	YKR043C	SNT1	P25357	1226 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	YCR099C	P25657	155 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	YME1	P32795	747 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	TOM20	P35180	183 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	STB6	P36085	766 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	CCT6	P39079	546 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	ARH1	P48360	493 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	HST2	P53686	357 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	SWS2	P53937	143 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	KTR5	P53966	522 aa	Predicted RBP	10.18	□□□□□ -0.78
SHB17	YKR043C	TGL2	P54857	326 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	RTT10	Q08924	1013 aa		10.18	□□□□□ -0.78
SHB17	YKR043C	TUB1	P09733	447 aa	Known RBP	10.17	□□□□□ -0.78
SHB17	YKR043C	NFU1	P32860	256 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	PRP18	P33411	251 aa	Predicted RBP	10.17	□□□□□ -0.78
SHB17	YKR043C	YPS6	P40583	537 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	YFR018C	P43599	363 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	ZIP2	P53061	704 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	ARP4	P80428	489 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	OSH6	Q02201	448 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	TRM82	Q03774	444 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	EMI1	Q04406	187 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	RSC2	Q06488	889 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	SYT1	Q06836	1226 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	TRM8	Q12009	286 aa		10.17	□□□□□ -0.78
SHB17	YKR043C	VPS68	Q12016	184 aa		10.17	□□□□□ -0.78

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