RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W COY1P34237 679 aa4.29□□□□□ -1.72
MSN4YKL062W RMA1P36001 430 aaKnown RBP4.29□□□□□ -1.72
MSN4YKL062W TIF5P38431 405 aaKnown RBP4.29□□□□□ -1.72
MSN4YKL062W MTG2P38860 518 aa4.29□□□□□ -1.72
MSN4YKL062W ARB1P40024 610 aaKnown RBP4.29□□□□□ -1.72
MSN4YKL062W ATF1P40353 525 aa4.29□□□□□ -1.72
MSN4YKL062W VID28P40547 921 aa4.29□□□□□ -1.72
MSN4YKL062W TAF4P50105 388 aa4.29□□□□□ -1.72
MSN4YKL062W YGR151CP53287 111 aa4.29□□□□□ -1.72
MSN4YKL062W TOF2Q02208 771 aa4.29□□□□□ -1.72
MSN4YKL062W RBA50Q04418 439 aa4.29□□□□□ -1.72
MSN4YKL062W PML1Q07930 204 aaPredicted RBP4.29□□□□□ -1.72
MSN4YKL062W RTK1Q12100 620 aaPredicted RBP4.29□□□□□ -1.72
MSN4YKL062W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
MSN4YKL062W TAF3Q12297 353 aa4.29□□□□□ -1.72
MSN4YKL062W ACO1P19414 778 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
MSN4YKL062W CLB1P24868 471 aa4.28□□□□□ -1.72
MSN4YKL062W TEF4P36008 412 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W APE3P37302 537 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W CTP1P38152 299 aa4.28□□□□□ -1.72
MSN4YKL062W SRP68P38687 599 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W VPS45P38932 577 aa4.28□□□□□ -1.72
MSN4YKL062W MRX1P40050 688 aa4.28□□□□□ -1.72
MSN4YKL062W EPL1P43572 832 aa4.28□□□□□ -1.72
MSN4YKL062W LYS4P49367 693 aaPredicted RBP4.28□□□□□ -1.72
MSN4YKL062W PSP1P50896 841 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W VPS73P53142 486 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W YSA1Q01976 231 aa4.28□□□□□ -1.72
MSN4YKL062W SPH1Q06160 661 aa4.28□□□□□ -1.72
MSN4YKL062W YLR456WQ06199 204 aa4.28□□□□□ -1.72
MSN4YKL062W YDL086WQ07505 273 aa4.28□□□□□ -1.72
MSN4YKL062W IWR1Q07532 353 aaPredicted RBP4.28□□□□□ -1.72
MSN4YKL062W HOM2P13663 365 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W DMC1P25453 334 aa4.28□□□□□ -1.72
MSN4YKL062W FUB1P25659 250 aa4.28□□□□□ -1.72
MSN4YKL062W PRE4P30657 266 aa4.28□□□□□ -1.72
MSN4YKL062W NTH1P32356 751 aa4.28□□□□□ -1.72
MSN4YKL062W CCL1P37366 393 aa4.28□□□□□ -1.72
MSN4YKL062W YHR097CP38809 366 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W SPT8P38915 602 aa4.28□□□□□ -1.72
MSN4YKL062W BDH2P39713 417 aa4.28□□□□□ -1.72
MSN4YKL062W YJR061WP40355 935 aa4.28□□□□□ -1.72
MSN4YKL062W MAD2P40958 196 aa4.28□□□□□ -1.72
MSN4YKL062W BUD27P43573 796 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
MSN4YKL062W NGL3Q03210 505 aa4.28□□□□□ -1.72
MSN4YKL062W MMR1Q06324 491 aa4.28□□□□□ -1.72
MSN4YKL062W CTI6Q08923 506 aa4.28□□□□□ -1.72
MSN4YKL062W SPE3Q12074 293 aaKnown RBP4.28□□□□□ -1.72
MSN4YKL062W GPM3Q12326 303 aa4.28□□□□□ -1.72
MSN4YKL062W SKM1Q12469 655 aa4.28□□□□□ -1.72
MSN4YKL062W SEC53P07283 254 aaKnown RBP4.27□□□□□ -1.73
MSN4YKL062W YEL076C-AP0CX16 216 aa4.27□□□□□ -1.73
MSN4YKL062W YLR464WP0CX17 216 aa4.27□□□□□ -1.73
MSN4YKL062W SIR1P21691 654 aa4.27□□□□□ -1.73
MSN4YKL062W NTG1P31378 399 aa4.27□□□□□ -1.73
MSN4YKL062W SMY1P32364 656 aaKnown RBP4.27□□□□□ -1.73
MSN4YKL062W MSS1P32559 526 aaPredicted RBP4.27□□□□□ -1.73
MSN4YKL062W SWH1P35845 1188 aa4.27□□□□□ -1.73
MSN4YKL062W GMH1P36125 273 aa4.27□□□□□ -1.73
MSN4YKL062W ADH5P38113 351 aaKnown RBP4.27□□□□□ -1.73
MSN4YKL062W YBL028CP38202 106 aa4.27□□□□□ -1.73
MSN4YKL062W TDP1P38319 544 aa4.27□□□□□ -1.73
MSN4YKL062W SMC2P38989 1170 aaKnown RBP4.27□□□□□ -1.73
MSN4YKL062W YEL076CP39971 216 aa4.27□□□□□ -1.73
MSN4YKL062W PRM2P40534 656 aa4.27□□□□□ -1.73
MSN4YKL062W SHE4P51534 789 aa4.27□□□□□ -1.73
MSN4YKL062W OGG1P53397 376 aaPredicted RBP4.27□□□□□ -1.73
MSN4YKL062W JJJ1P53863 590 aa4.27□□□□□ -1.73
MSN4YKL062W DON1Q05610 365 aa4.27□□□□□ -1.73
MSN4YKL062W SKG3Q06315 1026 aa4.27□□□□□ -1.73
MSN4YKL062W DIN7Q12086 430 aa4.27□□□□□ -1.73
MSN4YKL062W RTC5Q12108 567 aaKnown RBP4.27□□□□□ -1.73
MSN4YKL062W HUA2Q12134 243 aa4.27□□□□□ -1.73
MSN4YKL062W ISN1Q99312 450 aa4.27□□□□□ -1.73
MSN4YKL062W ADE3P07245 946 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W GRR1P24814 1151 aa4.26□□□□□ -1.73
MSN4YKL062W CWH43P25618 953 aa4.26□□□□□ -1.73
MSN4YKL062W URA7P28274 579 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W CAP1P28495 268 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W RME1P32338 300 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W MF(ALPHA)2P32435 120 aa4.26□□□□□ -1.73
MSN4YKL062W HEL1P36113 551 aa4.26□□□□□ -1.73
MSN4YKL062W YEL057CP39983 233 aa4.26□□□□□ -1.73
MSN4YKL062W PKP1P40530 394 aa4.26□□□□□ -1.73
MSN4YKL062W CUL3P53202 744 aa4.26□□□□□ -1.73
MSN4YKL062W DAK1P54838 584 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W NOP6Q07623 225 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W FMP45Q07651 309 aa4.26□□□□□ -1.73
MSN4YKL062W YBR126W-AQ8TGU7 68 aa4.26□□□□□ -1.73
MSN4YKL062W TAD3Q9URQ3 322 aa4.26□□□□□ -1.73
MSN4YKL062W RPB4P20433 221 aaPredicted RBP4.26□□□□□ -1.73
MSN4YKL062W YCK1P23291 538 aa4.26□□□□□ -1.73
MSN4YKL062W DGR2P32330 852 aa4.26□□□□□ -1.73
MSN4YKL062W YEL043WP32618 956 aa4.26□□□□□ -1.73
MSN4YKL062W SRO77P38163 1010 aa4.26□□□□□ -1.73
MSN4YKL062W KSP1P38691 1029 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W DED81P38707 554 aaKnown RBP4.26□□□□□ -1.73
MSN4YKL062W MUP3P38734 546 aa4.26□□□□□ -1.73
MSN4YKL062W PEX18P38855 283 aa4.26□□□□□ -1.73
MSN4YKL062W TCB2P48231 1178 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms