RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W NOP14Q99207 810 aaKnown RBP6.37□□□□□ -1.39
PRE3YJL001W BI3Q9ZZW7 517 aa6.37□□□□□ -1.39
PRE3YJL001W TOP3P13099 656 aa6.36□□□□□ -1.39
PRE3YJL001W EST1P17214 699 aaPredicted RBP6.36□□□□□ -1.39
PRE3YJL001W GYP6P32806 458 aa6.36□□□□□ -1.39
PRE3YJL001W DOM34P33309 386 aa6.36□□□□□ -1.39
PRE3YJL001W YKL151CP36059 337 aa6.36□□□□□ -1.39
PRE3YJL001W KAP104P38217 918 aaKnown RBP6.36□□□□□ -1.39
PRE3YJL001W YJL070CP40361 888 aa6.36□□□□□ -1.39
PRE3YJL001W SNZ3P43545 298 aa6.36□□□□□ -1.39
PRE3YJL001W SNZ2P53824 298 aa6.36□□□□□ -1.39
PRE3YJL001W SRP1Q02821 542 aaKnown RBP6.36□□□□□ -1.39
PRE3YJL001W HOS3Q02959 697 aaKnown RBP6.36□□□□□ -1.39
PRE3YJL001W GIC2Q06648 383 aa6.36□□□□□ -1.39
PRE3YJL001W AAD4Q07747 329 aa6.36□□□□□ -1.39
PRE3YJL001W NTG2Q08214 380 aa6.36□□□□□ -1.39
PRE3YJL001W AIM39Q08223 395 aa6.36□□□□□ -1.39
PRE3YJL001W RPN8Q08723 338 aaKnown RBP6.36□□□□□ -1.39
PRE3YJL001W SRO7Q12038 1033 aa6.36□□□□□ -1.39
PRE3YJL001W YPR053CQ6Q5F3 151 aa6.36□□□□□ -1.39
PRE3YJL001W UBR1P19812 1950 aa6.36□□□□□ -1.39
PRE3YJL001W CDC37P06101 506 aaKnown RBP6.35□□□□□ -1.39
PRE3YJL001W ADE17P38009 592 aaKnown RBP6.35□□□□□ -1.39
PRE3YJL001W APM3P38153 483 aa6.35□□□□□ -1.39
PRE3YJL001W FSH1P38777 243 aaKnown RBP6.35□□□□□ -1.39
PRE3YJL001W PPE1P38796 400 aa6.35□□□□□ -1.39
PRE3YJL001W LYS9P38999 446 aa6.35□□□□□ -1.39
PRE3YJL001W PRM9P39551 298 aa6.35□□□□□ -1.39
PRE3YJL001W SIT1P39980 628 aa6.35□□□□□ -1.39
PRE3YJL001W FET5P43561 622 aa6.35□□□□□ -1.39
PRE3YJL001W AIM14P53109 570 aa6.35□□□□□ -1.39
PRE3YJL001W COG7P53195 279 aa6.35□□□□□ -1.39
PRE3YJL001W PEX31P53203 462 aa6.35□□□□□ -1.39
PRE3YJL001W TNA1P53322 534 aa6.35□□□□□ -1.39
PRE3YJL001W YML096WQ04489 525 aa6.35□□□□□ -1.39
PRE3YJL001W GFD1Q04839 188 aaKnown RBP6.35□□□□□ -1.39
PRE3YJL001W ACM1Q08981 209 aa6.35□□□□□ -1.39
PRE3YJL001W CWC2Q12046 339 aaPredicted RBP6.35□□□□□ -1.39
PRE3YJL001W YPR071WQ12346 211 aa6.35□□□□□ -1.39
PRE3YJL001W PEX11Q12462 236 aa6.35□□□□□ -1.39
PRE3YJL001W VPS5Q92331 675 aa6.35□□□□□ -1.39
PRE3YJL001W HIS1P00498 297 aaKnown RBP6.34□□□□□ -1.39
PRE3YJL001W AI3P03877 415 aa6.34□□□□□ -1.39
PRE3YJL001W ADE8P04161 214 aa6.34□□□□□ -1.39
PRE3YJL001W PCT1P13259 424 aa6.34□□□□□ -1.39
PRE3YJL001W STE4P18851 423 aa6.34□□□□□ -1.39
PRE3YJL001W SEC1P30619 724 aaKnown RBP6.34□□□□□ -1.39
PRE3YJL001W KAR9P32526 644 aa6.34□□□□□ -1.39
PRE3YJL001W YSC84P32793 468 aa6.34□□□□□ -1.39
PRE3YJL001W YET1P35723 206 aa6.34□□□□□ -1.39
PRE3YJL001W YRO2P38079 344 aa6.34□□□□□ -1.39
PRE3YJL001W TAE1P38340 232 aa6.34□□□□□ -1.39
PRE3YJL001W YIL108WP40483 696 aaKnown RBP6.34□□□□□ -1.39
PRE3YJL001W UBP6P43593 499 aaKnown RBP6.34□□□□□ -1.39
PRE3YJL001W CIS3P47001 227 aa6.34□□□□□ -1.39
PRE3YJL001W YGR283CP53336 341 aaPredicted RBP6.34□□□□□ -1.39
PRE3YJL001W ORC3P54790 616 aa6.34□□□□□ -1.39
PRE3YJL001W UGO1Q03327 502 aa6.34□□□□□ -1.39
PRE3YJL001W YOR059CQ08448 450 aaKnown RBP6.34□□□□□ -1.39
PRE3YJL001W SUC2P00724 532 aa6.33□□□□□ -1.4
PRE3YJL001W MIS1P09440 975 aaKnown RBP6.33□□□□□ -1.4
PRE3YJL001W KAR3P17119 729 aa6.33□□□□□ -1.4
PRE3YJL001W MRPL8P22353 238 aa6.33□□□□□ -1.4
PRE3YJL001W GSY2P27472 705 aa6.33□□□□□ -1.4
PRE3YJL001W BRF1P29056 596 aa6.33□□□□□ -1.4
PRE3YJL001W PEX6P33760 1030 aa6.33□□□□□ -1.4
PRE3YJL001W MCX1P38323 520 aaPredicted RBP6.33□□□□□ -1.4
PRE3YJL001W CCT8P47079 568 aaKnown RBP6.33□□□□□ -1.4
PRE3YJL001W NBP35P52920 328 aa6.33□□□□□ -1.4
PRE3YJL001W MNT2P53059 558 aa6.33□□□□□ -1.4
PRE3YJL001W TAD1P53065 400 aa6.33□□□□□ -1.4
PRE3YJL001W CSL4P53859 292 aaPredicted RBP6.33□□□□□ -1.4
PRE3YJL001W ELP3Q02908 557 aaKnown RBP6.33□□□□□ -1.4
PRE3YJL001W TDA6Q06466 467 aa6.33□□□□□ -1.4
PRE3YJL001W THI73Q07904 523 aa6.33□□□□□ -1.4
PRE3YJL001W CIR2Q08822 631 aa6.33□□□□□ -1.4
PRE3YJL001W YBR056W-AI2HB52 66 aa6.32□□□□□ -1.4
PRE3YJL001W DAL82P21705 255 aa6.32□□□□□ -1.4
PRE3YJL001W PRO1P32264 428 aa6.32□□□□□ -1.4
PRE3YJL001W CDC12P32468 407 aaKnown RBP6.32□□□□□ -1.4
PRE3YJL001W SRP68P38687 599 aaKnown RBP6.32□□□□□ -1.4
PRE3YJL001W MIP6P38760 659 aaKnown RBP6.32□□□□□ -1.4
PRE3YJL001W SPT8P38915 602 aa6.32□□□□□ -1.4
PRE3YJL001W GLG2P47011 380 aa6.32□□□□□ -1.4
PRE3YJL001W MAL11P53048 616 aa6.32□□□□□ -1.4
PRE3YJL001W YTP1P53584 459 aa6.32□□□□□ -1.4
PRE3YJL001W INA17Q02888 182 aa6.32□□□□□ -1.4
PRE3YJL001W INP2Q03824 705 aa6.32□□□□□ -1.4
PRE3YJL001W GRX8Q05926 109 aa6.32□□□□□ -1.4
PRE3YJL001W BNA5Q05979 453 aa6.32□□□□□ -1.4
PRE3YJL001W SUL2Q12325 893 aa6.32□□□□□ -1.4
PRE3YJL001W SST2P11972 698 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W YPK1P12688 680 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W SPT15P13393 240 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W POL30P15873 258 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W TUP1P16649 713 aa6.31□□□□□ -1.4
PRE3YJL001W ADY2P25613 283 aa6.31□□□□□ -1.4
PRE3YJL001W LIP5P32875 414 aa6.31□□□□□ -1.4
PRE3YJL001W NIP100P33420 868 aa6.31□□□□□ -1.4
PRE3YJL001W FUI1P38196 639 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms