RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN10, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN10	YHR200W	YJR124C	P47159	448 aa		13.9	□□□□□ -0.18
RPN10	YHR200W	SPP2	Q02521	185 aa		13.9	□□□□□ -0.18
RPN10	YHR200W	CHS5	Q12114	671 aa	Known RBP	13.9	□□□□□ -0.18
RPN10	YHR200W	PRP16	P15938	1071 aa	Predicted RBP	13.89	□□□□□ -0.19
RPN10	YHR200W	TRX2	P22803	104 aa	Known RBP	13.89	□□□□□ -0.19
RPN10	YHR200W	SRP72	P38688	640 aa	Known RBP	13.89	□□□□□ -0.19
RPN10	YHR200W	STN1	P38960	494 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	ACO2	P39533	789 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	ALG8	P40351	577 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	PAN6	P40459	309 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	ERG10	P41338	398 aa	Known RBP	13.89	□□□□□ -0.19
RPN10	YHR200W	PET130	P47065	347 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	CSN12	P47130	423 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	COG1	P53079	417 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	YNL143C	P53908	130 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	PPN1	Q04119	674 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	HRK1	Q08732	759 aa	Known RBP	13.89	□□□□□ -0.19
RPN10	YHR200W	YOR338W	Q99326	363 aa		13.89	□□□□□ -0.19
RPN10	YHR200W	SEM1	O94742	89 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	SGF29	P25554	259 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	IMG2	P25642	146 aa	Predicted RBP	13.88	□□□□□ -0.19
RPN10	YHR200W	MCM5	P29496	775 aa	Known RBP	13.88	□□□□□ -0.19
RPN10	YHR200W	SCD5	P34758	872 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	MED6	P38782	295 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	GCD14	P46959	383 aa	Predicted RBP	13.88	□□□□□ -0.19
RPN10	YHR200W	RSM7	P47150	247 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	TVP15	Q03860	143 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	YDR132C	Q03900	495 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	NUS1	Q12063	375 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	DAP1	Q12091	152 aa		13.88	□□□□□ -0.19
RPN10	YHR200W	NOT5	Q12514	560 aa	Predicted RBP	13.88	□□□□□ -0.19
RPN10	YHR200W	NMT1	P14743	455 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	HSC82	P15108	705 aa	Known RBP	13.87	□□□□□ -0.19
RPN10	YHR200W	BET2	P20133	325 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	STE13	P33894	931 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	AXL1	P40851	1208 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	IME4	P41833	600 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	MNT2	P53059	558 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	BOL2	P53082	120 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	SFB2	P53953	876 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	SEC10	Q06245	871 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	YLR149C	Q99296	730 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	MPD2	Q99316	277 aa		13.87	□□□□□ -0.19
RPN10	YHR200W	COX6	P00427	148 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	GLN4	P13188	809 aa	Known RBP	13.86	□□□□□ -0.19
RPN10	YHR200W	BAS1	P22035	811 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	GUT2	P32191	649 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	SWE1	P32944	819 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	YMR102C	Q03177	834 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	YHM2	Q04013	314 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	SPC24	Q04477	213 aa		13.86	□□□□□ -0.19
RPN10	YHR200W	HEM2	P05373	342 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	PRP4	P20053	465 aa	Known RBP	13.85	□□□□□ -0.19
RPN10	YHR200W	YCR099C	P25657	155 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	TFC3	P34111	1160 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	ASK1	P35734	292 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	ALY1	P36117	915 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	LRP1	P38801	184 aa	Known RBP	13.85	□□□□□ -0.19
RPN10	YHR200W	RPH1	P39956	796 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	TES1	P41903	349 aa	Known RBP	13.85	□□□□□ -0.19
RPN10	YHR200W	MRM2	P53123	320 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	YMR178W	Q03219	274 aa	Known RBP	13.85	□□□□□ -0.19
RPN10	YHR200W	CSN9	Q03981	162 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	VTA1	Q06263	330 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	RSB1	Q08417	382 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	MDY2	Q12285	212 aa		13.85	□□□□□ -0.19
RPN10	YHR200W	STE2	D6VTK4	431 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	RHO2	P06781	192 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	YMR085W	P0CF18	432 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	SBP1	P10080	294 aa	Known RBP	13.84	□□□□□ -0.19
RPN10	YHR200W	AMD1	P15274	810 aa	Known RBP	13.84	□□□□□ -0.19
RPN10	YHR200W	SNT1	P25357	1226 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	YCR090C	P25654	182 aa	Known RBP	13.84	□□□□□ -0.19
RPN10	YHR200W	RRN3	P36070	627 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	OSW5	P40219	148 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	MAD3	P47074	515 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	CIA1	Q05583	330 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	BLS1	Q06071	122 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	RAD59	Q12223	238 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	GTT2	Q12390	233 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	RMD5	Q12508	421 aa		13.84	□□□□□ -0.19
RPN10	YHR200W	LEU1	P07264	779 aa	Known RBP	13.83	□□□□□ -0.2
RPN10	YHR200W	MPH2	P0CD99	609 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	EXO70	P19658	623 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	VAC17	P25591	423 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	PYC2	P32327	1180 aa	Known RBP	13.83	□□□□□ -0.2
RPN10	YHR200W	BZZ1	P38822	633 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	RPL34B	P40525	121 aa	Known RBP	13.83	□□□□□ -0.2
RPN10	YHR200W	GTS1	P40956	396 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	GTR1	Q00582	310 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	YMR155W	Q03795	547 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	PER33	Q12144	273 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	MCD1	Q12158	566 aa		13.83	□□□□□ -0.2
RPN10	YHR200W	RRP36	Q12481	300 aa	Predicted RBP	13.83	□□□□□ -0.2
RPN10	YHR200W	YPR089W	O13585	888 aa		13.82	□□□□□ -0.2
RPN10	YHR200W	HIS5	P07172	385 aa		13.82	□□□□□ -0.2
RPN10	YHR200W	FUS1	P11710	512 aa		13.82	□□□□□ -0.2
RPN10	YHR200W	APA1	P16550	321 aa	Known RBP	13.82	□□□□□ -0.2
RPN10	YHR200W	FPR1	P20081	114 aa	Known RBP	13.82	□□□□□ -0.2
RPN10	YHR200W	PUP3	P25451	205 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms