RNA–Protein interactions for RNA: YHR139C

SPS100, Transcript of Protein required for spore wall maturation, yeastyeast

Gene SPS100, Length 981 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPS100YHR139C SYT1Q06836 1226 aa8.72□□□□□ -1.01
SPS100YHR139C RMD5Q12508 421 aa8.72□□□□□ -1.01
SPS100YHR139C FRT1Q99332 602 aa8.72□□□□□ -1.01
SPS100YHR139C MPH2P0CD99 609 aa8.71□□□□□ -1.02
SPS100YHR139C SRV2P17555 526 aaKnown RBP8.71□□□□□ -1.02
SPS100YHR139C SEC14P24280 304 aaKnown RBP8.71□□□□□ -1.02
SPS100YHR139C MSH2P25847 964 aa8.71□□□□□ -1.02
SPS100YHR139C KIP2P28743 706 aa8.71□□□□□ -1.02
SPS100YHR139C BEM3P32873 1128 aa8.71□□□□□ -1.02
SPS100YHR139C CYM1P32898 989 aa8.71□□□□□ -1.02
SPS100YHR139C PHO11P35842 467 aa8.71□□□□□ -1.02
SPS100YHR139C LDB7P38210 180 aa8.71□□□□□ -1.02
SPS100YHR139C PHO12P38693 467 aa8.71□□□□□ -1.02
SPS100YHR139C ACO2P39533 789 aa8.71□□□□□ -1.02
SPS100YHR139C RPH1P39956 796 aa8.71□□□□□ -1.02
SPS100YHR139C TFG1P41895 735 aaPredicted RBP8.71□□□□□ -1.02
SPS100YHR139C YLR053CQ12026 108 aa8.71□□□□□ -1.02
SPS100YHR139C SLP1Q12232 587 aa8.71□□□□□ -1.02
SPS100YHR139C KCS1Q12494 1050 aa8.71□□□□□ -1.02
SPS100YHR139C GLN4P13188 809 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C HOM2P13663 365 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C UBA1P22515 1024 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C YCR051WP25631 222 aa8.7□□□□□ -1.02
SPS100YHR139C YCR099CP25657 155 aa8.7□□□□□ -1.02
SPS100YHR139C GUT2P32191 649 aa8.7□□□□□ -1.02
SPS100YHR139C GCD11P32481 527 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C PMT1P33775 817 aa8.7□□□□□ -1.02
SPS100YHR139C YJL206CP39529 758 aa8.7□□□□□ -1.02
SPS100YHR139C DSN1P40568 576 aa8.7□□□□□ -1.02
SPS100YHR139C SET2P46995 733 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C BUD32P53323 261 aa8.7□□□□□ -1.02
SPS100YHR139C AQR1P53943 586 aa8.7□□□□□ -1.02
SPS100YHR139C SMA1Q02651 245 aa8.7□□□□□ -1.02
SPS100YHR139C RPC11Q04307 110 aaPredicted RBP8.7□□□□□ -1.02
SPS100YHR139C FAR8Q05040 523 aa8.7□□□□□ -1.02
SPS100YHR139C NUT2Q06213 157 aa8.7□□□□□ -1.02
SPS100YHR139C TDA5Q06417 326 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C HRK1Q08732 759 aaKnown RBP8.7□□□□□ -1.02
SPS100YHR139C NCA2Q12374 616 aa8.7□□□□□ -1.02
SPS100YHR139C RGS2Q99188 309 aa8.7□□□□□ -1.02
SPS100YHR139C HCM1P25364 564 aa8.69□□□□□ -1.02
SPS100YHR139C MRPL9P31334 269 aa8.69□□□□□ -1.02
SPS100YHR139C RRP14P36080 434 aaKnown RBP8.69□□□□□ -1.02
SPS100YHR139C STB6P36085 766 aa8.69□□□□□ -1.02
SPS100YHR139C YSW1P38280 609 aa8.69□□□□□ -1.02
SPS100YHR139C SRP72P38688 640 aaKnown RBP8.69□□□□□ -1.02
SPS100YHR139C HXT5P38695 592 aa8.69□□□□□ -1.02
SPS100YHR139C YHR078WP38799 552 aa8.69□□□□□ -1.02
SPS100YHR139C PIK1P39104 1066 aa8.69□□□□□ -1.02
SPS100YHR139C MNN1P39106 762 aa8.69□□□□□ -1.02
SPS100YHR139C PEP8P40335 379 aa8.69□□□□□ -1.02
SPS100YHR139C HOS4P40480 1083 aa8.69□□□□□ -1.02
SPS100YHR139C GTS1P40956 396 aa8.69□□□□□ -1.02
SPS100YHR139C YJL107CP42947 387 aa8.69□□□□□ -1.02
SPS100YHR139C CIA1Q05583 330 aa8.69□□□□□ -1.02
SPS100YHR139C YLR177WQ06251 628 aa8.69□□□□□ -1.02
SPS100YHR139C TGL5Q12043 749 aa8.69□□□□□ -1.02
SPS100YHR139C YMR030W-AQ3E760 96 aa8.69□□□□□ -1.02
SPS100YHR139C STE2D6VTK4 431 aa8.68□□□□□ -1.02
SPS100YHR139C GCY1P14065 312 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
SPS100YHR139C APA1P16550 321 aaKnown RBP8.68□□□□□ -1.02
SPS100YHR139C AMD2P22580 549 aa8.68□□□□□ -1.02
SPS100YHR139C SPS19P32573 292 aaKnown RBP8.68□□□□□ -1.02
SPS100YHR139C LIN1P38852 340 aaPredicted RBP8.68□□□□□ -1.02
SPS100YHR139C STN1P38960 494 aa8.68□□□□□ -1.02
SPS100YHR139C CIN4P39110 191 aa8.68□□□□□ -1.02
SPS100YHR139C HAT2P39984 401 aa8.68□□□□□ -1.02
SPS100YHR139C SEC28P40509 296 aaKnown RBP8.68□□□□□ -1.02
SPS100YHR139C IRR1P40541 1150 aa8.68□□□□□ -1.02
SPS100YHR139C IME4P41833 600 aa8.68□□□□□ -1.02
SPS100YHR139C LIA1P47120 325 aaKnown RBP8.68□□□□□ -1.02
SPS100YHR139C SWC4P53201 476 aa8.68□□□□□ -1.02
SPS100YHR139C FRE4P53746 719 aa8.68□□□□□ -1.02
SPS100YHR139C CWC24P53769 259 aa8.68□□□□□ -1.02
SPS100YHR139C NIS1P53939 407 aa8.68□□□□□ -1.02
SPS100YHR139C ADE12P80210 433 aaKnown RBP8.68□□□□□ -1.02
SPS100YHR139C YMR209CQ03648 457 aa8.68□□□□□ -1.02
SPS100YHR139C TAF11Q04226 346 aa8.68□□□□□ -1.02
SPS100YHR139C HPF1Q05164 967 aa8.68□□□□□ -1.02
SPS100YHR139C NUS1Q12063 375 aa8.68□□□□□ -1.02
SPS100YHR139C SPS1P08458 490 aa8.67□□□□□ -1.02
SPS100YHR139C GAL11P19659 1081 aa8.67□□□□□ -1.02
SPS100YHR139C GIP1P38229 639 aa8.67□□□□□ -1.02
SPS100YHR139C YHR182WP38870 785 aa8.67□□□□□ -1.02
SPS100YHR139C ARP4P80428 489 aa8.67□□□□□ -1.02
SPS100YHR139C YDR131CQ03899 556 aa8.67□□□□□ -1.02
SPS100YHR139C OPI10Q08202 246 aa8.67□□□□□ -1.02
SPS100YHR139C BUD7Q08754 746 aa8.67□□□□□ -1.02
SPS100YHR139C GNT1Q12096 491 aa8.67□□□□□ -1.02
SPS100YHR139C ABF1P14164 731 aa8.66□□□□□ -1.02
SPS100YHR139C CHL1P22516 861 aaPredicted RBP8.66□□□□□ -1.02
SPS100YHR139C PHO3P24031 467 aa8.66□□□□□ -1.02
SPS100YHR139C SIS1P25294 352 aaKnown RBP8.66□□□□□ -1.02
SPS100YHR139C CCR4P31384 837 aaKnown RBP8.66□□□□□ -1.02
SPS100YHR139C MF(ALPHA)2P32435 120 aa8.66□□□□□ -1.02
SPS100YHR139C PRP18P33411 251 aaPredicted RBP8.66□□□□□ -1.02
SPS100YHR139C TCD2P36101 447 aaKnown RBP8.66□□□□□ -1.02
SPS100YHR139C PCL5P38794 229 aa8.66□□□□□ -1.02
SPS100YHR139C TIM17P39515 158 aa8.66□□□□□ -1.02
SPS100YHR139C OAF1P39720 1047 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms