RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W BAR1P12630 587 aa3.23□□□□□ -1.89
RPF1YHR088W IMA1P53051 589 aa3.23□□□□□ -1.89
RPF1YHR088W EIS1Q05050 843 aaKnown RBP3.23□□□□□ -1.89
RPF1YHR088W IWR1Q07532 353 aaPredicted RBP3.23□□□□□ -1.89
RPF1YHR088W PPT2Q12036 173 aa3.23□□□□□ -1.89
RPF1YHR088W DAP1Q12091 152 aa3.23□□□□□ -1.89
RPF1YHR088W KRS1P15180 591 aaKnown RBP3.22□□□□□ -1.89
RPF1YHR088W PDR3P33200 976 aa3.22□□□□□ -1.89
RPF1YHR088W MRX1P40050 688 aa3.22□□□□□ -1.89
RPF1YHR088W RPN11P43588 306 aaKnown RBP3.22□□□□□ -1.89
RPF1YHR088W CEG1Q01159 459 aaPredicted RBP3.22□□□□□ -1.89
RPF1YHR088W SUL2Q12325 893 aa3.22□□□□□ -1.89
RPF1YHR088W MIS1P09440 975 aaKnown RBP3.21□□□□□ -1.9
RPF1YHR088W YML003WP0CF16 290 aa3.21□□□□□ -1.9
RPF1YHR088W RFA2P26754 273 aaKnown RBP3.21□□□□□ -1.9
RPF1YHR088W SAC1P32368 623 aaKnown RBP3.21□□□□□ -1.9
RPF1YHR088W LHS1P36016 881 aa3.21□□□□□ -1.9
RPF1YHR088W DED81P38707 554 aaKnown RBP3.21□□□□□ -1.9
RPF1YHR088W FSH1P38777 243 aaKnown RBP3.21□□□□□ -1.9
RPF1YHR088W RTS2P40962 232 aa3.21□□□□□ -1.9
RPF1YHR088W MAD3P47074 515 aa3.21□□□□□ -1.9
RPF1YHR088W SMA1Q02651 245 aa3.21□□□□□ -1.9
RPF1YHR088W POL3P15436 1097 aa3.2□□□□□ -1.9
RPF1YHR088W SPO16P17122 198 aa3.2□□□□□ -1.9
RPF1YHR088W RIT1P23796 513 aa3.2□□□□□ -1.9
RPF1YHR088W YSP3P25036 478 aa3.2□□□□□ -1.9
RPF1YHR088W BUD14P27637 709 aa3.2□□□□□ -1.9
RPF1YHR088W ADE17P38009 592 aaKnown RBP3.2□□□□□ -1.9
RPF1YHR088W RGI2P40188 164 aa3.2□□□□□ -1.9
RPF1YHR088W DIM1P41819 318 aaKnown RBP3.2□□□□□ -1.9
RPF1YHR088W PFA5Q03289 374 aa3.2□□□□□ -1.9
RPF1YHR088W YDR415CQ04033 374 aaPredicted RBP3.2□□□□□ -1.9
RPF1YHR088W SWA2Q06677 668 aa3.2□□□□□ -1.9
RPF1YHR088W SWT1Q12104 458 aa3.2□□□□□ -1.9
RPF1YHR088W BSC1Q12140 328 aa3.2□□□□□ -1.9
RPF1YHR088W CBS2P14905 389 aa3.19□□□□□ -1.9
RPF1YHR088W PDA1P16387 420 aaKnown RBP3.19□□□□□ -1.9
RPF1YHR088W TKL1P23254 680 aaKnown RBP3.19□□□□□ -1.9
RPF1YHR088W CLB2P24869 491 aa3.19□□□□□ -1.9
RPF1YHR088W GID7P25569 745 aa3.19□□□□□ -1.9
RPF1YHR088W MIC60P36112 540 aa3.19□□□□□ -1.9
RPF1YHR088W AAP1P37898 856 aaKnown RBP3.19□□□□□ -1.9
RPF1YHR088W TAM41P53230 385 aa3.19□□□□□ -1.9
RPF1YHR088W EKI1Q03764 534 aa3.19□□□□□ -1.9
RPF1YHR088W SRP54P20424 541 aaKnown RBP3.18□□□□□ -1.9
RPF1YHR088W RPB8P20436 146 aa3.18□□□□□ -1.9
RPF1YHR088W YIL161WP40449 235 aaKnown RBP3.18□□□□□ -1.9
RPF1YHR088W CTK2P46962 323 aa3.18□□□□□ -1.9
RPF1YHR088W SGF73P53165 657 aa3.18□□□□□ -1.9
RPF1YHR088W TEP1P53916 434 aa3.18□□□□□ -1.9
RPF1YHR088W TLG2Q08144 397 aa3.18□□□□□ -1.9
RPF1YHR088W ADE3P07245 946 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W CHO1P08456 276 aa3.17□□□□□ -1.9
RPF1YHR088W RAP1P11938 827 aa3.17□□□□□ -1.9
RPF1YHR088W SST2P11972 698 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W ARP2P32381 391 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W SOF1P33750 489 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W NUP120P35729 1037 aa3.17□□□□□ -1.9
RPF1YHR088W UBP13P38187 747 aa3.17□□□□□ -1.9
RPF1YHR088W SEC31P38968 1273 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W FAF1P40546 346 aaPredicted RBP3.17□□□□□ -1.9
RPF1YHR088W MKT1P40850 830 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W CPR6P53691 371 aaKnown RBP3.17□□□□□ -1.9
RPF1YHR088W YOL114CQ12322 202 aa3.17□□□□□ -1.9
RPF1YHR088W PIF1P07271 859 aa3.16□□□□□ -1.9
RPF1YHR088W GLN3P18494 730 aa3.16□□□□□ -1.9
RPF1YHR088W GAC1P28006 793 aa3.16□□□□□ -1.9
RPF1YHR088W STV1P37296 890 aa3.16□□□□□ -1.9
RPF1YHR088W RRP3P38712 501 aaKnown RBP3.16□□□□□ -1.9
RPF1YHR088W MDM31P38880 579 aa3.16□□□□□ -1.9
RPF1YHR088W YHR218WP38899 603 aa3.16□□□□□ -1.9
RPF1YHR088W ZAP1P47043 880 aa3.16□□□□□ -1.9
RPF1YHR088W SHE10P53075 577 aa3.16□□□□□ -1.9
RPF1YHR088W EDE1P34216 1381 aa3.15□□□□□ -1.9
RPF1YHR088W REV1P12689 985 aa3.15□□□□□ -1.91
RPF1YHR088W GEX2P36173 615 aa3.15□□□□□ -1.91
RPF1YHR088W APM3P38153 483 aa3.15□□□□□ -1.91
RPF1YHR088W YBP1P38315 674 aa3.15□□□□□ -1.91
RPF1YHR088W RFC1P38630 861 aaKnown RBP3.15□□□□□ -1.91
RPF1YHR088W HXT9P40885 567 aa3.15□□□□□ -1.91
RPF1YHR088W MAK10Q02197 733 aa3.15□□□□□ -1.91
RPF1YHR088W CSR1Q06705 408 aaKnown RBP3.15□□□□□ -1.91
RPF1YHR088W CSR2Q12734 1121 aa3.15□□□□□ -1.91
RPF1YHR088W PET111P08468 800 aa3.14□□□□□ -1.91
RPF1YHR088W YKL133CP36066 463 aa3.14□□□□□ -1.91
RPF1YHR088W EXO84P38261 753 aa3.14□□□□□ -1.91
RPF1YHR088W RTS1P38903 757 aa3.14□□□□□ -1.91
RPF1YHR088W KRE9P39005 276 aa3.14□□□□□ -1.91
RPF1YHR088W PHO90P39535 881 aa3.14□□□□□ -1.91
RPF1YHR088W YJL068CP40363 299 aa3.14□□□□□ -1.91
RPF1YHR088W AZF1P41696 914 aa3.14□□□□□ -1.91
RPF1YHR088W FET5P43561 622 aa3.14□□□□□ -1.91
RPF1YHR088W YGL242CP53066 181 aa3.14□□□□□ -1.91
RPF1YHR088W FOL1P53848 824 aa3.14□□□□□ -1.91
RPF1YHR088W VAM6Q07468 1049 aa3.14□□□□□ -1.91
RPF1YHR088W NTR2P36118 322 aaPredicted RBP3.13□□□□□ -1.91
RPF1YHR088W AVT5P38176 459 aa3.13□□□□□ -1.91
RPF1YHR088W ERG7P38604 731 aa3.13□□□□□ -1.91
RPF1YHR088W RPT2P40327 437 aaKnown RBP3.13□□□□□ -1.91
RPF1YHR088W YJL132WP47014 750 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms