RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN1	YHR027C	YEH1	Q07804	573 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	MCH5	Q08777	521 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	YPR202W	Q08993	238 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	AEP3	Q12089	606 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	LYS21	Q12122	440 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	YOL107W	Q12239	342 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	PHM7	Q12252	991 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	HMS1	Q12398	434 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	TSC13	Q99190	310 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	THS1	P04801	734 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	RAD10	P06838	210 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	PGS1	P25578	521 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	RPS7A	P26786	190 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	RAD14	P28519	371 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	ORC2	P32833	620 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	JEN1	P36035	616 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	YBL028C	P38202	106 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	YHR131C	P38835	850 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	NOP16	P40007	231 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	UTP25	P40498	721 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	ROG3	P43602	733 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	MRK1	P50873	501 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	YGR111W	P53265	400 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	CAF120	P53836	1060 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	NIS1	P53939	407 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	RPL22B	P56628	122 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	UTP6	Q02354	440 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	ARL3	Q02804	198 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	RSC9	Q03124	581 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	SEG1	Q04279	960 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	ARP10	Q04549	284 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	KAP95	Q06142	861 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	YFT2	Q06676	274 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	PUS9	Q12069	462 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	GET3	Q12154	354 aa	Known RBP	3.15	□□□□□ -1.91
RPN1	YHR027C	DCN1	Q12395	269 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	DFG16	Q99234	619 aa		3.15	□□□□□ -1.91
RPN1	YHR027C	TRP2	P00899	507 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	TRP3	P00937	484 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	ARG3	P05150	338 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	PUT2	P07275	575 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	CDC23	P16522	626 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	NPP1	P25353	742 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SEC1	P30619	724 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	GUT2	P32191	649 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	LYP1	P32487	611 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	VAM7	P32912	316 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SKG1	P36169	355 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	DUG2	P38149	878 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	CDS1	P38221	457 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	STB5	P38699	743 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SPC97	P38863	823 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	YHR202W	P38887	602 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	FRT2	P39734	528 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SOK1	P40317	901 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	CSM2	P40465	213 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	ERG10	P41338	398 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	PSA1	P41940	361 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	CCT7	P42943	550 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	GYP8	P43570	497 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	RPE1	P46969	238 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	GLG2	P47011	380 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SAP4	P53036	818 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	MNT2	P53059	558 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	YNL193W	P53870	558 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SKI8	Q02793	397 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	SAS4	Q04003	481 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	GMC2	Q06201	188 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	NBA1	Q08229	501 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	ACM1	Q08981	209 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	RRI2	Q12348	645 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	YOR131C	Q12486	218 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	BI2	P03873	423 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	RPP1A	P05318	106 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	RHO1	P06780	209 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	NUC1	P08466	329 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	CHS2	P14180	963 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	AAC3	P18238	307 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	VPS34	P22543	875 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	AMD2	P22580	549 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	CTS1	P29029	562 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	GPI10	P30777	616 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	ASF2	P32448	525 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	RRN6	P32786	894 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	GDH2	P33327	1092 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	TOM20	P35180	183 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	MIF2	P35201	549 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	SCO2	P38072	301 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	ERG7	P38604	731 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	HAL5	P38970	855 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	RFC2	P40348	353 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	YIL055C	P40523	627 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	COX16	P47081	118 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	LIA1	P47120	325 aa	Known RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	MND1	P53102	219 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	YGL036W	P53185	909 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN1	YHR027C	SCS7	Q03529	384 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	MUM3	Q08750	479 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	FEX2	Q08991	375 aa		3.14	□□□□□ -1.91
RPN1	YHR027C	WRS1	Q12109	432 aa	Known RBP	3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms