RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W RPL19BP0CX83 189 aaPredicted RBP3.88□□□□□ -1.79
PTI1YGR156W SEC12P11655 471 aa3.88□□□□□ -1.79
PTI1YGR156W AAC3P18238 307 aa3.88□□□□□ -1.79
PTI1YGR156W RPS7AP26786 190 aaKnown RBP3.88□□□□□ -1.79
PTI1YGR156W RKM3P38222 552 aa3.88□□□□□ -1.79
PTI1YGR156W STB5P38699 743 aa3.88□□□□□ -1.79
PTI1YGR156W ARB1P40024 610 aaKnown RBP3.88□□□□□ -1.79
PTI1YGR156W CBK1P53894 756 aa3.88□□□□□ -1.79
PTI1YGR156W BSP1Q06604 576 aa3.88□□□□□ -1.79
PTI1YGR156W PDR15Q04182 1529 aaKnown RBP3.87□□□□□ -1.79
PTI1YGR156W YPR089WO13585 888 aa3.87□□□□□ -1.79
PTI1YGR156W RPB2P08518 1224 aaKnown RBP3.87□□□□□ -1.79
PTI1YGR156W CAP1P28495 268 aaKnown RBP3.87□□□□□ -1.79
PTI1YGR156W TEF4P36008 412 aaKnown RBP3.87□□□□□ -1.79
PTI1YGR156W ESL2P36168 1195 aa3.87□□□□□ -1.79
PTI1YGR156W UME6P39001 836 aa3.87□□□□□ -1.79
PTI1YGR156W FMP10P40098 244 aa3.87□□□□□ -1.79
PTI1YGR156W YRB30P53107 440 aaPredicted RBP3.87□□□□□ -1.79
PTI1YGR156W RPS15Q01855 142 aaKnown RBP3.87□□□□□ -1.79
PTI1YGR156W YPL108WQ02872 168 aaPredicted RBP3.87□□□□□ -1.79
PTI1YGR156W MRPL1Q04599 285 aa3.87□□□□□ -1.79
PTI1YGR156W RCO1Q04779 684 aa3.87□□□□□ -1.79
PTI1YGR156W CRC1Q12289 327 aa3.87□□□□□ -1.79
PTI1YGR156W RDL1Q12305 139 aaKnown RBP3.87□□□□□ -1.79
PTI1YGR156W PET122P10355 254 aa3.86□□□□□ -1.79
PTI1YGR156W MET8P15807 274 aa3.86□□□□□ -1.79
PTI1YGR156W RNR3P21672 869 aaKnown RBP3.86□□□□□ -1.79
PTI1YGR156W GSY2P27472 705 aa3.86□□□□□ -1.79
PTI1YGR156W JNM1P36224 373 aa3.86□□□□□ -1.79
PTI1YGR156W YAP3P38749 330 aa3.86□□□□□ -1.79
PTI1YGR156W YFL015CP43578 164 aa3.86□□□□□ -1.79
PTI1YGR156W IDS2P46958 469 aa3.86□□□□□ -1.79
PTI1YGR156W TAM41P53230 385 aa3.86□□□□□ -1.79
PTI1YGR156W COX17Q12287 69 aa3.86□□□□□ -1.79
PTI1YGR156W YBR255C-AQ3E776 120 aa3.86□□□□□ -1.79
PTI1YGR156W FOB1O13329 566 aa3.85□□□□□ -1.79
PTI1YGR156W INH1P01097 85 aa3.85□□□□□ -1.79
PTI1YGR156W CTT1P06115 562 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-LR1P0C2J4 438 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-FP0CX61 438 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-GR2P0CX62 438 aa3.85□□□□□ -1.79
PTI1YGR156W YAP1P19880 650 aaKnown RBP3.85□□□□□ -1.79
PTI1YGR156W OLE1P21147 510 aaKnown RBP3.85□□□□□ -1.79
PTI1YGR156W TY2A-CP25383 438 aa3.85□□□□□ -1.79
PTI1YGR156W CMK1P27466 446 aaKnown RBP3.85□□□□□ -1.79
PTI1YGR156W URK1P27515 501 aa3.85□□□□□ -1.79
PTI1YGR156W CDC5P32562 705 aa3.85□□□□□ -1.79
PTI1YGR156W YPT10P38146 199 aa3.85□□□□□ -1.79
PTI1YGR156W SDH8P38345 138 aa3.85□□□□□ -1.79
PTI1YGR156W YEL068CP39977 110 aa3.85□□□□□ -1.79
PTI1YGR156W IRC6P43615 237 aa3.85□□□□□ -1.79
PTI1YGR156W ARC1P46672 376 aaKnown RBP3.85□□□□□ -1.79
PTI1YGR156W VPS4P52917 437 aa3.85□□□□□ -1.79
PTI1YGR156W YNR061CP53747 219 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-DR2Q03483 438 aa3.85□□□□□ -1.79
PTI1YGR156W WAR1Q03631 944 aa3.85□□□□□ -1.79
PTI1YGR156W NUP53Q03790 475 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-BQ12260 438 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-OR2Q12293 438 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-DR1Q12392 438 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-OR1Q12439 438 aa3.85□□□□□ -1.79
PTI1YGR156W TY2A-DR3Q99303 438 aa3.85□□□□□ -1.79
PTI1YGR156W SEC3P33332 1336 aaKnown RBP3.85□□□□□ -1.79
PTI1YGR156W NUP157P40064 1391 aaKnown RBP3.85□□□□□ -1.79
PTI1YGR156W MLP2P40457 1679 aa3.84□□□□□ -1.79
PTI1YGR156W BI2P03873 423 aa3.84□□□□□ -1.79
PTI1YGR156W TPK1P06244 397 aa3.84□□□□□ -1.79
PTI1YGR156W MRP7P12687 371 aa3.84□□□□□ -1.79
PTI1YGR156W PFK2P16862 959 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
PTI1YGR156W KGD2P19262 463 aaPredicted RBP3.84□□□□□ -1.79
PTI1YGR156W RAD16P31244 790 aa3.84□□□□□ -1.79
PTI1YGR156W MGM1P32266 881 aa3.84□□□□□ -1.79
PTI1YGR156W MRP20P32387 263 aa3.84□□□□□ -1.79
PTI1YGR156W NPL6P32832 435 aa3.84□□□□□ -1.79
PTI1YGR156W PSD1P39006 500 aa3.84□□□□□ -1.79
PTI1YGR156W SGM1P47166 707 aa3.84□□□□□ -1.79
PTI1YGR156W COG1P53079 417 aa3.84□□□□□ -1.79
PTI1YGR156W BSC5P53755 489 aa3.84□□□□□ -1.79
PTI1YGR156W YNL092WP53934 400 aa3.84□□□□□ -1.79
PTI1YGR156W GTB1Q04924 702 aa3.84□□□□□ -1.79
PTI1YGR156W TPO3Q06451 622 aa3.84□□□□□ -1.79
PTI1YGR156W ERP4Q12450 207 aa3.84□□□□□ -1.79
PTI1YGR156W VCX1Q99385 411 aa3.84□□□□□ -1.79
PTI1YGR156W TY3B-GQ99315 1547 aa3.84□□□□□ -1.8
PTI1YGR156W DNF3Q12674 1656 aa3.84□□□□□ -1.8
PTI1YGR156W YML003WP0CF16 290 aa3.83□□□□□ -1.8
PTI1YGR156W SAC6P32599 642 aaKnown RBP3.83□□□□□ -1.8
PTI1YGR156W CNS1P33313 385 aa3.83□□□□□ -1.8
PTI1YGR156W CCL1P37366 393 aa3.83□□□□□ -1.8
PTI1YGR156W NOP4P37838 685 aaKnown RBP3.83□□□□□ -1.8
PTI1YGR156W CCT4P39078 528 aaKnown RBP3.83□□□□□ -1.8
PTI1YGR156W NPR2P39923 615 aa3.83□□□□□ -1.8
PTI1YGR156W YJR061WP40355 935 aa3.83□□□□□ -1.8
PTI1YGR156W IST3P40565 148 aaPredicted RBP3.83□□□□□ -1.8
PTI1YGR156W SCM3Q12334 223 aa3.83□□□□□ -1.8
PTI1YGR156W ENT1Q12518 454 aa3.83□□□□□ -1.8
PTI1YGR156W ARO1P08566 1588 aaKnown RBP3.82□□□□□ -1.8
PTI1YGR156W ATP2P00830 511 aaKnown RBP3.82□□□□□ -1.8
PTI1YGR156W ERG8P24521 451 aa3.82□□□□□ -1.8
PTI1YGR156W GCS1P35197 352 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms