RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	ARA1	P38115	344 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	MCM7	P38132	845 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	HPM1	P40481	377 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	IMA5	P40884	581 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	CAF16	P43569	289 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	RPS12	P48589	143 aa	Known RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	FOL2	P51601	243 aa	Known RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	CWC23	P52868	283 aa	Predicted RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	PIP2	P52960	996 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	PGA2	P53903	129 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	SPP1	Q03012	353 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	YMR279C	Q03263	540 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	DUS3	Q06053	668 aa	Known RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	KAP95	Q06142	861 aa	Known RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	REH1	Q06709	432 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
MDR1	YGR100W	THI20	Q08224	551 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	SNX3	Q08826	162 aa	Known RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	FRE3	Q08905	711 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	PGC1	Q08959	321 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	WRS1	Q12109	432 aa	Known RBP	4.6	□□□□□ -1.67
MDR1	YGR100W	GLO4	Q12320	285 aa		4.6	□□□□□ -1.67
MDR1	YGR100W	ARG3	P05150	338 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	RHO1	P06780	209 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	FRS1	P15624	595 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	HEM15	P16622	393 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	CCR4	P31384	837 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	MSG5	P38590	489 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	RIM11	P38615	370 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	PRS2	P38620	318 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	ORC6	P38826	435 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	PZF1	P39933	429 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	EMP65	P40085	556 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	RFC2	P40348	353 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YRB2	P40517	327 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	CIN1	P40987	1014 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	MSS2	P40990	351 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	IDS2	P46958	469 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	TIM54	P47045	478 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	IRC8	P47046	822 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	LSM8	P47093	109 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	COG1	P53079	417 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	RSC9	Q03124	581 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YMR027W	Q04371	470 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	FMP45	Q07651	309 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YLR053C	Q12026	108 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	DGK1	Q12382	290 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	HO	P09932	586 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	NFT1	P0CE68	1218 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	RIT1	P23796	513 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	CPR5	P35176	225 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	EAP1	P36041	632 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	CDS1	P38221	457 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	IMD2	P38697	523 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	GOS1	P38736	223 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YDR089W	P38966	869 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	STT3	P39007	718 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	YMR134W	P40207	237 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
MDR1	YGR100W	MNT2	P53059	558 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YTP1	P53584	459 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	ARC35	P53731	342 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	ARL3	Q02804	198 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YMR099C	Q03161	297 aa	Known RBP	4.59	□□□□□ -1.67
MDR1	YGR100W	MRX10	Q05648	414 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	YLR352W	Q06479	807 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	THI3	Q07471	609 aa		4.59	□□□□□ -1.67
MDR1	YGR100W	CBS2	P14905	389 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	PFK1	P16861	987 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	SRO9	P25567	434 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	VMA6	P32366	345 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	MEI5	P32489	222 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	UGP1	P32861	499 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	SDS22	P36047	338 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	SKG1	P36169	355 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	YBL036C	P38197	257 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	SOH1	P38633	127 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	VPS29	P38759	282 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	GPB2	P39717	880 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	PRK1	P40494	810 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	CCT7	P42943	550 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	PTK2	P47116	818 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	YGR125W	P53273	1036 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	HOL1	P53389	586 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	YNL193W	P53870	558 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	DAK1	P54838	584 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	CWC21	Q03375	135 aa	Known RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	NSE5	Q03718	556 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	RRP17	Q04031	235 aa	Predicted RBP	4.59	□□□□□ -1.68
MDR1	YGR100W	SPC2	Q04969	178 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	CST9	Q06032	482 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	VTA1	Q06263	330 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	THI21	Q08975	551 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	HER1	Q12276	1246 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	ARP7	Q12406	477 aa		4.59	□□□□□ -1.68
MDR1	YGR100W	ATP2	P00830	511 aa	Known RBP	4.58	□□□□□ -1.68
MDR1	YGR100W	TRP3	P00937	484 aa		4.58	□□□□□ -1.68
MDR1	YGR100W	MET17	P06106	444 aa		4.58	□□□□□ -1.68
MDR1	YGR100W	CDC23	P16522	626 aa		4.58	□□□□□ -1.68
MDR1	YGR100W	PPH22	P23595	377 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms