RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YOR019WQ99248 730 aa3.59□□□□□ -1.83
SEC4YFL005W YBR085C-AO43137 85 aa3.58□□□□□ -1.84
SEC4YFL005W SEM1O94742 89 aa3.58□□□□□ -1.84
SEC4YFL005W SUI3P09064 285 aaKnown RBP3.58□□□□□ -1.84
SEC4YFL005W HSC82P15108 705 aaKnown RBP3.58□□□□□ -1.84
SEC4YFL005W SAN1P22470 610 aa3.58□□□□□ -1.84
SEC4YFL005W SOF1P33750 489 aaKnown RBP3.58□□□□□ -1.84
SEC4YFL005W ESL2P36168 1195 aa3.58□□□□□ -1.84
SEC4YFL005W CIN1P40987 1014 aa3.58□□□□□ -1.84
SEC4YFL005W SWP82P43554 623 aa3.58□□□□□ -1.84
SEC4YFL005W BPL1P48445 690 aaPredicted RBP3.58□□□□□ -1.84
SEC4YFL005W YPR003CP53394 754 aa3.58□□□□□ -1.84
SEC4YFL005W ATP23P53722 227 aa3.58□□□□□ -1.84
SEC4YFL005W INN1P53901 409 aa3.58□□□□□ -1.84
SEC4YFL005W YKU80Q04437 629 aa3.58□□□□□ -1.84
SEC4YFL005W COG4Q06096 861 aa3.58□□□□□ -1.84
SEC4YFL005W ORM2Q06144 216 aa3.58□□□□□ -1.84
SEC4YFL005W TPO3Q06451 622 aa3.58□□□□□ -1.84
SEC4YFL005W YLR111WQ12528 110 aa3.58□□□□□ -1.84
SEC4YFL005W ILS1P09436 1072 aaKnown RBP3.57□□□□□ -1.84
SEC4YFL005W RPL19AP0CX82 189 aaKnown RBP3.57□□□□□ -1.84
SEC4YFL005W RPL19BP0CX83 189 aaPredicted RBP3.57□□□□□ -1.84
SEC4YFL005W ERG11P10614 530 aa3.57□□□□□ -1.84
SEC4YFL005W MRP2P10663 115 aaPredicted RBP3.57□□□□□ -1.84
SEC4YFL005W PRE8P23639 250 aa3.57□□□□□ -1.84
SEC4YFL005W RPN12P32496 274 aa3.57□□□□□ -1.84
SEC4YFL005W KTR3P38130 404 aaPredicted RBP3.57□□□□□ -1.84
SEC4YFL005W ERP2P39704 215 aa3.57□□□□□ -1.84
SEC4YFL005W ERV46P39727 415 aa3.57□□□□□ -1.84
SEC4YFL005W UPF3P48412 387 aaKnown RBP3.57□□□□□ -1.84
SEC4YFL005W ORC5P50874 479 aa3.57□□□□□ -1.84
SEC4YFL005W RSM28Q03430 361 aa3.57□□□□□ -1.84
SEC4YFL005W SNU56Q03782 492 aaKnown RBP3.57□□□□□ -1.84
SEC4YFL005W VIP1Q06685 1146 aaKnown RBP3.57□□□□□ -1.84
SEC4YFL005W ENT4Q07872 247 aa3.57□□□□□ -1.84
SEC4YFL005W GPN2Q08726 347 aaPredicted RBP3.57□□□□□ -1.84
SEC4YFL005W YOR111WQ99210 232 aa3.57□□□□□ -1.84
SEC4YFL005W PGK1P00560 416 aaKnown RBP3.56□□□□□ -1.84
SEC4YFL005W AAC3P18238 307 aa3.56□□□□□ -1.84
SEC4YFL005W APN1P22936 367 aa3.56□□□□□ -1.84
SEC4YFL005W MBR1P23493 339 aa3.56□□□□□ -1.84
SEC4YFL005W MSS51P32335 436 aa3.56□□□□□ -1.84
SEC4YFL005W NOP4P37838 685 aaKnown RBP3.56□□□□□ -1.84
SEC4YFL005W ADE17P38009 592 aaKnown RBP3.56□□□□□ -1.84
SEC4YFL005W UBP13P38187 747 aa3.56□□□□□ -1.84
SEC4YFL005W SEC24P40482 926 aaKnown RBP3.56□□□□□ -1.84
SEC4YFL005W LYS14P40971 790 aa3.56□□□□□ -1.84
SEC4YFL005W CDC1P40986 491 aa3.56□□□□□ -1.84
SEC4YFL005W IRC7P43623 340 aa3.56□□□□□ -1.84
SEC4YFL005W NMD5P46970 1048 aa3.56□□□□□ -1.84
SEC4YFL005W IST1P53843 298 aaPredicted RBP3.56□□□□□ -1.84
SEC4YFL005W YSA1Q01976 231 aa3.56□□□□□ -1.84
SEC4YFL005W INA17Q02888 182 aa3.56□□□□□ -1.84
SEC4YFL005W RAD30Q04049 632 aa3.56□□□□□ -1.84
SEC4YFL005W SEG1Q04279 960 aa3.56□□□□□ -1.84
SEC4YFL005W SKG3Q06315 1026 aa3.56□□□□□ -1.84
SEC4YFL005W MED1Q12321 566 aa3.56□□□□□ -1.84
SEC4YFL005W FRE7Q12333 620 aa3.56□□□□□ -1.84
SEC4YFL005W URE2P23202 354 aaKnown RBP3.55□□□□□ -1.84
SEC4YFL005W SAC6P32599 642 aaKnown RBP3.55□□□□□ -1.84
SEC4YFL005W YBL029WP38201 376 aa3.55□□□□□ -1.84
SEC4YFL005W YNG2P38806 282 aaKnown RBP3.55□□□□□ -1.84
SEC4YFL005W RTS1P38903 757 aa3.55□□□□□ -1.84
SEC4YFL005W ECM10P39987 644 aa3.55□□□□□ -1.84
SEC4YFL005W YGL036WP53185 909 aaPredicted RBP3.55□□□□□ -1.84
SEC4YFL005W RIM13Q03792 727 aa3.55□□□□□ -1.84
SEC4YFL005W IMH1Q06704 911 aaKnown RBP3.55□□□□□ -1.84
SEC4YFL005W RIX7Q07844 837 aaKnown RBP3.55□□□□□ -1.84
SEC4YFL005W HUA2Q12134 243 aa3.55□□□□□ -1.84
SEC4YFL005W YBR126W-AQ8TGU7 68 aa3.55□□□□□ -1.84
SEC4YFL005W HXK2P04807 486 aaKnown RBP3.54□□□□□ -1.84
SEC4YFL005W PET111P08468 800 aa3.54□□□□□ -1.84
SEC4YFL005W NUP1P20676 1076 aa3.54□□□□□ -1.84
SEC4YFL005W PDB1P32473 366 aaKnown RBP3.54□□□□□ -1.84
SEC4YFL005W OCT1P35999 772 aa3.54□□□□□ -1.84
SEC4YFL005W ARN1P38731 627 aa3.54□□□□□ -1.84
SEC4YFL005W YJL107CP42947 387 aa3.54□□□□□ -1.84
SEC4YFL005W SNO3P43544 222 aa3.54□□□□□ -1.84
SEC4YFL005W CTK2P46962 323 aa3.54□□□□□ -1.84
SEC4YFL005W DUO1P53168 247 aaKnown RBP3.54□□□□□ -1.84
SEC4YFL005W IDP3P53982 420 aaKnown RBP3.54□□□□□ -1.84
SEC4YFL005W PDR8Q06149 701 aa3.54□□□□□ -1.84
SEC4YFL005W PSR1Q07800 427 aa3.54□□□□□ -1.84
SEC4YFL005W TCO89Q08921 799 aa3.54□□□□□ -1.84
SEC4YFL005W YLR049CQ12110 428 aa3.54□□□□□ -1.84
SEC4YFL005W RTP1Q12751 981 aa3.54□□□□□ -1.84
SEC4YFL005W YCK1P23291 538 aa3.53□□□□□ -1.84
SEC4YFL005W PTP1P25044 335 aa3.53□□□□□ -1.84
SEC4YFL005W YCR006CP25350 157 aa3.53□□□□□ -1.84
SEC4YFL005W TPA1P40032 644 aaKnown RBP3.53□□□□□ -1.84
SEC4YFL005W JHD1P40034 492 aa3.53□□□□□ -1.84
SEC4YFL005W STB2P46679 850 aa3.53□□□□□ -1.84
SEC4YFL005W DPB11P47027 764 aaPredicted RBP3.53□□□□□ -1.84
SEC4YFL005W BNA3P47039 444 aaKnown RBP3.53□□□□□ -1.84
SEC4YFL005W YLR455WQ06188 304 aa3.53□□□□□ -1.84
SEC4YFL005W PIG1Q06216 648 aa3.53□□□□□ -1.84
SEC4YFL005W NMD4Q12129 218 aa3.53□□□□□ -1.84
SEC4YFL005W GET3Q12154 354 aaKnown RBP3.53□□□□□ -1.84
SEC4YFL005W NOP58Q12499 511 aaKnown RBP3.53□□□□□ -1.84
SEC4YFL005W SEC53P07283 254 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms