RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C SEC1P30619 724 aaKnown RBP1.12□□□□□ -2.23
UBP3YER151C TCA17P32613 152 aa1.12□□□□□ -2.23
UBP3YER151C BCS1P32839 456 aa1.12□□□□□ -2.23
UBP3YER151C PRY2P36110 329 aa1.12□□□□□ -2.23
UBP3YER151C HEK2P38199 381 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23 RIP-Chip
UBP3YER151C BEM4P39011 633 aa1.12□□□□□ -2.23
UBP3YER151C CCT5P40413 562 aaKnown RBP1.12□□□□□ -2.23
UBP3YER151C XBP1P40489 647 aa1.12□□□□□ -2.23
UBP3YER151C SPO22P40511 975 aa1.12□□□□□ -2.23
UBP3YER151C YJR039WP47107 1121 aa1.12□□□□□ -2.23
UBP3YER151C RFX1P48743 811 aa1.12□□□□□ -2.23
UBP3YER151C SNF12P53628 566 aa1.12□□□□□ -2.23
UBP3YER151C TOF2Q02208 771 aa1.12□□□□□ -2.23
UBP3YER151C INP2Q03824 705 aa1.12□□□□□ -2.23
UBP3YER151C YMR087WQ04299 284 aa1.12□□□□□ -2.23
UBP3YER151C YLR407WQ06070 228 aa1.12□□□□□ -2.23
UBP3YER151C NFI1Q12216 726 aa1.12□□□□□ -2.23
UBP3YER151C PDH1Q12428 516 aaKnown RBP1.12□□□□□ -2.23
UBP3YER151C PCD1Q12524 340 aa1.12□□□□□ -2.23
UBP3YER151C YDR034W-BQ6Q5X2 51 aa1.12□□□□□ -2.23
UBP3YER151C NOP14Q99207 810 aaKnown RBP1.12□□□□□ -2.23
UBP3YER151C PHO2P07269 559 aa1.11□□□□□ -2.23
UBP3YER151C RPS19AP07280 144 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C RPS19BP07281 144 aaPredicted RBP1.11□□□□□ -2.23
UBP3YER151C PCT1P13259 424 aa1.11□□□□□ -2.23
UBP3YER151C CDC26P14724 124 aa1.11□□□□□ -2.23
UBP3YER151C SEC18P18759 758 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C ATP12P22135 325 aa1.11□□□□□ -2.23
UBP3YER151C MNE1P24720 663 aa1.11□□□□□ -2.23
UBP3YER151C SUA7P29055 345 aaPredicted RBP1.11□□□□□ -2.23
UBP3YER151C MVD1P32377 396 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C MTC7P32633 139 aa1.11□□□□□ -2.23
UBP3YER151C ECM32P32644 1121 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C TVP38P36164 337 aa1.11□□□□□ -2.23
UBP3YER151C ECM13P38195 257 aa1.11□□□□□ -2.23
UBP3YER151C HSL7P38274 827 aa1.11□□□□□ -2.23
UBP3YER151C BAT1P38891 393 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C RTS1P38903 757 aa1.11□□□□□ -2.23
UBP3YER151C MNN1P39106 762 aa1.11□□□□□ -2.23
UBP3YER151C DPH1P40487 425 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C BUD8P41698 603 aa1.11□□□□□ -2.23
UBP3YER151C YJR096WP47137 282 aa1.11□□□□□ -2.23
UBP3YER151C TRF5P48561 642 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C VPS4P52917 437 aa1.11□□□□□ -2.23
UBP3YER151C IPI3P53877 555 aa1.11□□□□□ -2.23
UBP3YER151C ORC4P54791 529 aa1.11□□□□□ -2.23
UBP3YER151C RHO3Q00245 231 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C ECM9Q02202 377 aa1.11□□□□□ -2.23
UBP3YER151C GFD1Q04839 188 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C STP4Q07351 490 aa1.11□□□□□ -2.23
UBP3YER151C SLK19Q08581 821 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C USV1Q12132 391 aa1.11□□□□□ -2.23
UBP3YER151C CEX1Q12453 761 aa1.11□□□□□ -2.23
UBP3YER151C YDR524C-BQ3E6R4 66 aa1.11□□□□□ -2.23
UBP3YER151C RAD61Q99359 647 aa1.11□□□□□ -2.23
UBP3YER151C CBP1P07252 654 aa1.11□□□□□ -2.23
UBP3YER151C RPL43AP0CX25 92 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C RPL43BP0CX26 92 aa1.11□□□□□ -2.23
UBP3YER151C ERG11P10614 530 aa1.11□□□□□ -2.23
UBP3YER151C APE1P14904 514 aa1.11□□□□□ -2.23
UBP3YER151C MCM3P24279 971 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C YCP4P25349 247 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C CMK1P27466 446 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C URK1P27515 501 aa1.11□□□□□ -2.23
UBP3YER151C YMC1P32331 307 aa1.11□□□□□ -2.23
UBP3YER151C SFC1P33303 322 aa1.11□□□□□ -2.23
UBP3YER151C GMH1P36125 273 aa1.11□□□□□ -2.23
UBP3YER151C UBA4P38820 440 aa1.11□□□□□ -2.23
UBP3YER151C RTT107P38850 1070 aa1.11□□□□□ -2.23
UBP3YER151C FRT2P39734 528 aa1.11□□□□□ -2.23
UBP3YER151C ACA1P39970 489 aa1.11□□□□□ -2.23
UBP3YER151C AIM22P47051 409 aa1.11□□□□□ -2.23
UBP3YER151C YLR036CQ07986 203 aa1.11□□□□□ -2.23
UBP3YER151C LYS21Q12122 440 aaKnown RBP1.11□□□□□ -2.23
UBP3YER151C SEC39Q12745 709 aa1.11□□□□□ -2.23
UBP3YER151C GLN4P13188 809 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C FRS2P15625 503 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C PEX1P24004 1043 aa1.1□□□□□ -2.23
UBP3YER151C FEN2P25621 512 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C RPT5P33297 434 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C MPE1P35728 441 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C TCD2P36101 447 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C MRX3P38172 270 aa1.1□□□□□ -2.23
UBP3YER151C YBR096WP38256 230 aa1.1□□□□□ -2.23
UBP3YER151C NOC2P39744 710 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C OSW5P40219 148 aa1.1□□□□□ -2.23
UBP3YER151C GPP1P41277 250 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C IRC8P47046 822 aa1.1□□□□□ -2.23
UBP3YER151C YDL183CP48569 320 aa1.1□□□□□ -2.23
UBP3YER151C SAP4P53036 818 aa1.1□□□□□ -2.23
UBP3YER151C MTQ2Q03920 221 aaPredicted RBP1.1□□□□□ -2.23
UBP3YER151C MCP2Q06567 569 aa1.1□□□□□ -2.23
UBP3YER151C YDL057WQ07379 328 aa1.1□□□□□ -2.23
UBP3YER151C BUD7Q08754 746 aa1.1□□□□□ -2.23
UBP3YER151C PHO5P00635 467 aa1.1□□□□□ -2.23
UBP3YER151C RPS3P05750 240 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C ADE3P07245 946 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C RPL4AP10664 362 aaKnown RBP1.1□□□□□ -2.23
UBP3YER151C SEC63P14906 663 aa1.1□□□□□ -2.23
UBP3YER151C SCL1P21243 252 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms