RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YNL058CP53947 316 aa7.84□□□□□ -1.15
PUP3YER094C VAC7P53950 1165 aa7.84□□□□□ -1.15
PUP3YER094C SFB2P53953 876 aa7.84□□□□□ -1.15
PUP3YER094C RNY1Q02933 434 aaKnown RBP7.84□□□□□ -1.15
PUP3YER094C YDR132CQ03900 495 aa7.84□□□□□ -1.15
PUP3YER094C CSN9Q03981 162 aa7.84□□□□□ -1.15
PUP3YER094C LCB5Q06147 687 aaKnown RBP7.84□□□□□ -1.15
PUP3YER094C CLP1Q08685 445 aaPredicted RBP7.84□□□□□ -1.15
PUP3YER094C FLC1Q08967 793 aa7.84□□□□□ -1.15
PUP3YER094C SNT1P25357 1226 aa7.83□□□□□ -1.16
PUP3YER094C PUP3P25451 205 aaKnown RBP7.83□□□□□ -1.16
PUP3YER094C YCR099CP25657 155 aa7.83□□□□□ -1.16
PUP3YER094C YSC84P32793 468 aa7.83□□□□□ -1.16
PUP3YER094C ASK1P35734 292 aa7.83□□□□□ -1.16
PUP3YER094C HEK2P38199 381 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
PUP3YER094C HSM3P38348 480 aa7.83□□□□□ -1.16
PUP3YER094C NEM1P38757 446 aa7.83□□□□□ -1.16
PUP3YER094C MNN1P39106 762 aa7.83□□□□□ -1.16
PUP3YER094C HAT2P39984 401 aa7.83□□□□□ -1.16
PUP3YER094C ALG8P40351 577 aa7.83□□□□□ -1.16
PUP3YER094C YJR124CP47159 448 aa7.83□□□□□ -1.16
PUP3YER094C FLC3P53121 802 aa7.83□□□□□ -1.16
PUP3YER094C CRN1Q06440 651 aa7.83□□□□□ -1.16
PUP3YER094C HRK1Q08732 759 aaKnown RBP7.83□□□□□ -1.16
PUP3YER094C NUS1Q12063 375 aa7.83□□□□□ -1.16
PUP3YER094C COX6P00427 148 aa7.82□□□□□ -1.16
PUP3YER094C SPS1P08458 490 aa7.82□□□□□ -1.16
PUP3YER094C KEX2P13134 814 aa7.82□□□□□ -1.16
PUP3YER094C BAS1P22035 811 aa7.82□□□□□ -1.16
PUP3YER094C VAC17P25591 423 aa7.82□□□□□ -1.16
PUP3YER094C PPZ1P26570 692 aa7.82□□□□□ -1.16
PUP3YER094C MF(ALPHA)2P32435 120 aa7.82□□□□□ -1.16
PUP3YER094C STE13P33894 931 aa7.82□□□□□ -1.16
PUP3YER094C YKL097CP34245 136 aa7.82□□□□□ -1.16
PUP3YER094C YKR023WP36119 530 aaKnown RBP7.82□□□□□ -1.16
PUP3YER094C RIM2P38127 377 aa7.82□□□□□ -1.16
PUP3YER094C SRP72P38688 640 aaKnown RBP7.82□□□□□ -1.16
PUP3YER094C YDR089WP38966 869 aa7.82□□□□□ -1.16
PUP3YER094C ACO2P39533 789 aa7.82□□□□□ -1.16
PUP3YER094C ARC1P46672 376 aaKnown RBP7.82□□□□□ -1.16
PUP3YER094C EMC4P53073 190 aa7.82□□□□□ -1.16
PUP3YER094C ADE12P80210 433 aaKnown RBP7.82□□□□□ -1.16
PUP3YER094C VPS16Q03308 798 aa7.82□□□□□ -1.16
PUP3YER094C NUT2Q06213 157 aa7.82□□□□□ -1.16
PUP3YER094C NOB1Q08444 459 aaKnown RBP7.82□□□□□ -1.16
PUP3YER094C DAP1Q12091 152 aa7.82□□□□□ -1.16
PUP3YER094C APC9Q12107 265 aa7.82□□□□□ -1.16
PUP3YER094C PER33Q12144 273 aa7.82□□□□□ -1.16
PUP3YER094C RMD5Q12508 421 aa7.82□□□□□ -1.16
PUP3YER094C YPT6Q99260 215 aa7.82□□□□□ -1.16
PUP3YER094C FAB1P34756 2278 aa7.81□□□□□ -1.16
PUP3YER094C STE2D6VTK4 431 aa7.81□□□□□ -1.16
PUP3YER094C YPR089WO13585 888 aa7.81□□□□□ -1.16
PUP3YER094C RPS14AP06367 137 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C FUS1P11710 512 aa7.81□□□□□ -1.16
PUP3YER094C ABF1P14164 731 aa7.81□□□□□ -1.16
PUP3YER094C PRP4P20053 465 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C RPB4P20433 221 aaPredicted RBP7.81□□□□□ -1.16
PUP3YER094C TRX2P22803 104 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C YJU3P28321 313 aa7.81□□□□□ -1.16
PUP3YER094C NIP1P32497 812 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C YBR259WP38338 688 aa7.81□□□□□ -1.16
PUP3YER094C GND1P38720 489 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C RPS14BP39516 138 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C AXL1P40851 1208 aa7.81□□□□□ -1.16
PUP3YER094C RNR4P49723 345 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C BOL2P53082 120 aa7.81□□□□□ -1.16
PUP3YER094C SUB1P54000 292 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C OSH6Q02201 448 aa7.81□□□□□ -1.16
PUP3YER094C YMR102CQ03177 834 aa7.81□□□□□ -1.16
PUP3YER094C YMR178WQ03219 274 aaKnown RBP7.81□□□□□ -1.16
PUP3YER094C NHP10Q03435 203 aa7.81□□□□□ -1.16
PUP3YER094C PPN1Q04119 674 aa7.81□□□□□ -1.16
PUP3YER094C SEC10Q06245 871 aa7.81□□□□□ -1.16
PUP3YER094C TGL5Q12043 749 aa7.81□□□□□ -1.16
PUP3YER094C UBX3Q12229 455 aa7.81□□□□□ -1.16
PUP3YER094C MDY2Q12285 212 aa7.81□□□□□ -1.16
PUP3YER094C STB3Q12427 513 aa7.81□□□□□ -1.16
PUP3YER094C FRT1Q99332 602 aa7.81□□□□□ -1.16
PUP3YER094C HIS5P07172 385 aa7.8□□□□□ -1.16
PUP3YER094C SEC53P07283 254 aaKnown RBP7.8□□□□□ -1.16
PUP3YER094C MSF1P08425 469 aa7.8□□□□□ -1.16
PUP3YER094C SBP1P10080 294 aaKnown RBP7.8□□□□□ -1.16
PUP3YER094C SEC63P14906 663 aa7.8□□□□□ -1.16
PUP3YER094C PRP16P15938 1071 aaPredicted RBP7.8□□□□□ -1.16
PUP3YER094C MRM1P25270 412 aa7.8□□□□□ -1.16
PUP3YER094C OXP1P28273 1286 aa7.8□□□□□ -1.16
PUP3YER094C GUT2P32191 649 aa7.8□□□□□ -1.16
PUP3YER094C PYC2P32327 1180 aaKnown RBP7.8□□□□□ -1.16
PUP3YER094C TOA1P32773 286 aa7.8□□□□□ -1.16
PUP3YER094C STB6P36085 766 aa7.8□□□□□ -1.16
PUP3YER094C LRP1P38801 184 aaKnown RBP7.8□□□□□ -1.16
PUP3YER094C SHU2P38957 223 aa7.8□□□□□ -1.16
PUP3YER094C IME4P41833 600 aa7.8□□□□□ -1.16
PUP3YER094C UBP6P43593 499 aaKnown RBP7.8□□□□□ -1.16
PUP3YER094C RMD8P43620 662 aa7.8□□□□□ -1.16
PUP3YER094C MAD3P47074 515 aa7.8□□□□□ -1.16
PUP3YER094C AIF1P52923 378 aa7.8□□□□□ -1.16
PUP3YER094C ARP4P80428 489 aa7.8□□□□□ -1.16
PUP3YER094C SPP2Q02521 185 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms