RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W SNT1P25357 1226 aa1.72□□□□□ -2.13
CFT1YDR301W CBF2P32504 956 aa1.72□□□□□ -2.13
CFT1YDR301W AIM26P32858 118 aa1.72□□□□□ -2.13
CFT1YDR301W MRP8P35719 219 aa1.72□□□□□ -2.13
CFT1YDR301W PHO11P35842 467 aa1.72□□□□□ -2.13
CFT1YDR301W ETR1P38071 380 aa1.72□□□□□ -2.13
CFT1YDR301W PHO12P38693 467 aa1.72□□□□□ -2.13
CFT1YDR301W SSP120P39931 234 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W ATM1P40416 690 aa1.72□□□□□ -2.13
CFT1YDR301W ROK1P45818 564 aaPredicted RBP1.72□□□□□ -2.13
CFT1YDR301W LIA1P47120 325 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W PYK2P52489 506 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W TAN1P53072 289 aaPredicted RBP1.72□□□□□ -2.13
CFT1YDR301W AIM14P53109 570 aa1.72□□□□□ -2.13
CFT1YDR301W ART5P53244 586 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W ALG12P53730 551 aa1.72□□□□□ -2.13
CFT1YDR301W MRS2Q01926 470 aa1.72□□□□□ -2.13
CFT1YDR301W ELP3Q02908 557 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W PIR1Q03178 341 aa1.72□□□□□ -2.13
CFT1YDR301W ADI1Q03677 179 aa1.72□□□□□ -2.13
CFT1YDR301W USA1Q03714 838 aa1.72□□□□□ -2.13
CFT1YDR301W FMN1Q03778 218 aa1.72□□□□□ -2.13
CFT1YDR301W NHX1Q04121 633 aa1.72□□□□□ -2.13
CFT1YDR301W RRB1Q04225 511 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W SEG1Q04279 960 aa1.72□□□□□ -2.13
CFT1YDR301W YOR059CQ08448 450 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W YOR387CQ08910 206 aa1.72□□□□□ -2.13
CFT1YDR301W YOR223WQ12015 292 aa1.72□□□□□ -2.13
CFT1YDR301W PER33Q12144 273 aa1.72□□□□□ -2.13
CFT1YDR301W YLR046CQ12253 270 aa1.72□□□□□ -2.13
CFT1YDR301W YKL068W-AQ3E826 78 aa1.72□□□□□ -2.13
CFT1YDR301W COX5AP00424 153 aa1.71□□□□□ -2.13
CFT1YDR301W SCH9P11792 824 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W CHL1P22516 861 aaPredicted RBP1.71□□□□□ -2.13
CFT1YDR301W PHO91P27514 894 aa1.71□□□□□ -2.13
CFT1YDR301W HRR25P29295 494 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W IMP3P32899 183 aaPredicted RBP1.71□□□□□ -2.13
CFT1YDR301W YPT52P36018 234 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W RIM2P38127 377 aa1.71□□□□□ -2.13
CFT1YDR301W LDB7P38210 180 aa1.71□□□□□ -2.13
CFT1YDR301W IML3P38265 245 aa1.71□□□□□ -2.13
CFT1YDR301W SRP68P38687 599 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W WSC4P38739 605 aa1.71□□□□□ -2.13
CFT1YDR301W SMF2P38778 549 aa1.71□□□□□ -2.13
CFT1YDR301W STL1P39932 569 aa1.71□□□□□ -2.13
CFT1YDR301W MID1P41821 548 aa1.71□□□□□ -2.13
CFT1YDR301W IME4P41833 600 aa1.71□□□□□ -2.13
CFT1YDR301W PSA1P41940 361 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W GLG2P47011 380 aa1.71□□□□□ -2.13
CFT1YDR301W URB2P47108 1174 aa1.71□□□□□ -2.13
CFT1YDR301W COQ6P53318 479 aa1.71□□□□□ -2.13
CFT1YDR301W CPR6P53691 371 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W BNI4P53858 892 aa1.71□□□□□ -2.13
CFT1YDR301W CLU1Q03690 1277 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W TAF11Q04226 346 aa1.71□□□□□ -2.13
CFT1YDR301W ADE13Q05911 482 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W YLR257WQ06146 321 aaKnown RBP1.71□□□□□ -2.13
CFT1YDR301W CBC2Q08920 208 aaKnown RBP RIP-Chip data1.71□□□□□ -2.13not detected
CFT1YDR301W TGL5Q12043 749 aa1.71□□□□□ -2.13
CFT1YDR301W SPE4Q12455 300 aa1.71□□□□□ -2.13
CFT1YDR301W PEX11Q12462 236 aa1.71□□□□□ -2.13
CFT1YDR301W CET1O13297 549 aaPredicted RBP1.71□□□□□ -2.14
CFT1YDR301W MDM35O60200 86 aa1.71□□□□□ -2.14
CFT1YDR301W PAB1P04147 577 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
CFT1YDR301W MET8P15807 274 aa1.71□□□□□ -2.14
CFT1YDR301W GID7P25569 745 aa1.71□□□□□ -2.14
CFT1YDR301W GEX1P25596 615 aa1.71□□□□□ -2.14
CFT1YDR301W UTR2P32623 467 aa1.71□□□□□ -2.14
CFT1YDR301W LIP5P32875 414 aa1.71□□□□□ -2.14
CFT1YDR301W LOS1P33418 1100 aaPredicted RBP1.71□□□□□ -2.14
CFT1YDR301W PXA2P34230 853 aa1.71□□□□□ -2.14
CFT1YDR301W THI80P35202 319 aa1.71□□□□□ -2.14
CFT1YDR301W SPT23P35210 1082 aa1.71□□□□□ -2.14
CFT1YDR301W OAF3P36023 863 aa1.71□□□□□ -2.14
CFT1YDR301W GEX2P36173 615 aa1.71□□□□□ -2.14
CFT1YDR301W CTP1P38152 299 aa1.71□□□□□ -2.14
CFT1YDR301W MRP21P38175 177 aa1.71□□□□□ -2.14
CFT1YDR301W YHI9P38765 294 aa1.71□□□□□ -2.14
CFT1YDR301W ALA1P40825 983 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W MKT1P40850 830 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W CHS6P40955 746 aa1.71□□□□□ -2.14
CFT1YDR301W IAH1P41734 238 aa1.71□□□□□ -2.14
CFT1YDR301W AIM23P47015 356 aa1.71□□□□□ -2.14
CFT1YDR301W ALY2P47029 1046 aa1.71□□□□□ -2.14
CFT1YDR301W CWC24P53769 259 aa1.71□□□□□ -2.14
CFT1YDR301W YNL144CP53907 740 aa1.71□□□□□ -2.14
CFT1YDR301W UBX4P54730 416 aa1.71□□□□□ -2.14
CFT1YDR301W PET117Q02771 107 aa1.71□□□□□ -2.14
CFT1YDR301W VHS1Q03785 461 aa1.71□□□□□ -2.14
CFT1YDR301W PPN1Q04119 674 aa1.71□□□□□ -2.14
CFT1YDR301W JIP5Q06214 492 aaPredicted RBP1.71□□□□□ -2.14
CFT1YDR301W GGA1Q06336 557 aa1.71□□□□□ -2.14
CFT1YDR301W IRC10Q08118 586 aa1.71□□□□□ -2.14
CFT1YDR301W ATG34Q12292 412 aa1.71□□□□□ -2.14
CFT1YDR301W AFI1Q99222 893 aa1.71□□□□□ -2.14
CFT1YDR301W TEF1P02994 458 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W ARG4P04076 463 aaPredicted RBP1.71□□□□□ -2.14
CFT1YDR301W SRV2P17555 526 aaKnown RBP1.71□□□□□ -2.14
CFT1YDR301W DAL81P21657 970 aa1.71□□□□□ -2.14
CFT1YDR301W YSR3P23501 404 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms