RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W HOG1P32485 435 aa2.28□□□□□ -2.04
UBP1YDL122W REC104P33323 182 aa2.28□□□□□ -2.04
UBP1YDL122W LAM1P38851 1228 aa2.28□□□□□ -2.04
UBP1YDL122W SMF1P38925 575 aa2.28□□□□□ -2.04
UBP1YDL122W LSM4P40070 187 aaKnown RBP2.28□□□□□ -2.04
UBP1YDL122W RSM25P40496 264 aa2.28□□□□□ -2.04
UBP1YDL122W SER33P40510 469 aa2.28□□□□□ -2.04
UBP1YDL122W DAM1P53267 343 aa2.28□□□□□ -2.04
UBP1YDL122W RSC3Q06639 885 aa2.28□□□□□ -2.04
UBP1YDL122W APL5Q08951 932 aaKnown RBP2.28□□□□□ -2.04
UBP1YDL122W MPH2P0CD99 609 aa2.27□□□□□ -2.05
UBP1YDL122W RPS8AP0CX39 200 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W RPS8BP0CX40 200 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W ASP3-2P0CX77 362 aa2.27□□□□□ -2.05
UBP1YDL122W ASP3-3P0CX78 362 aa2.27□□□□□ -2.05
UBP1YDL122W ASP3-4P0CX79 362 aa2.27□□□□□ -2.05
UBP1YDL122W ASP3-1P0CZ17 362 aa2.27□□□□□ -2.05
UBP1YDL122W HOM3P10869 527 aa2.27□□□□□ -2.05
UBP1YDL122W SNT1P25357 1226 aa2.27□□□□□ -2.05
UBP1YDL122W GFD2P25370 566 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W NFS1P25374 497 aa2.27□□□□□ -2.05
UBP1YDL122W ATO2P32907 282 aa2.27□□□□□ -2.05
UBP1YDL122W YBR056WP38081 501 aa2.27□□□□□ -2.05
UBP1YDL122W MAL32P38158 584 aa2.27□□□□□ -2.05
UBP1YDL122W EXO84P38261 753 aa2.27□□□□□ -2.05
UBP1YDL122W REI1P38344 393 aaPredicted RBP2.27□□□□□ -2.05
UBP1YDL122W HSE1P38753 452 aa2.27□□□□□ -2.05
UBP1YDL122W YAR028WP39548 234 aa2.27□□□□□ -2.05
UBP1YDL122W GPP2P40106 250 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W GID8P40208 455 aa2.27□□□□□ -2.05
UBP1YDL122W KHA1P40309 873 aa2.27□□□□□ -2.05
UBP1YDL122W TOK1P40310 691 aa2.27□□□□□ -2.05
UBP1YDL122W MNN11P46985 422 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W YGR283CP53336 341 aaPredicted RBP2.27□□□□□ -2.05
UBP1YDL122W SNO2P53823 222 aa2.27□□□□□ -2.05
UBP1YDL122W VTC3Q02725 835 aa2.27□□□□□ -2.05
UBP1YDL122W TSR1Q07381 788 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W YOR059CQ08448 450 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W RPL11AP0C0W9 174 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W REC107P21651 314 aa2.27□□□□□ -2.05
UBP1YDL122W CDC12P32468 407 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W EMC3P36039 253 aa2.27□□□□□ -2.05
UBP1YDL122W JNM1P36224 373 aa2.27□□□□□ -2.05
UBP1YDL122W DTR1P38125 572 aa2.27□□□□□ -2.05
UBP1YDL122W BIT2P38346 545 aa2.27□□□□□ -2.05
UBP1YDL122W YHL041WP38730 149 aa2.27□□□□□ -2.05
UBP1YDL122W YEL020CP39994 560 aa2.27□□□□□ -2.05
UBP1YDL122W KAP123P40069 1113 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W HIS6P40545 261 aa2.27□□□□□ -2.05
UBP1YDL122W CFD1P40558 293 aa2.27□□□□□ -2.05
UBP1YDL122W SAP185P40856 1058 aa2.27□□□□□ -2.05
UBP1YDL122W MMM1P41800 426 aa2.27□□□□□ -2.05
UBP1YDL122W YJR079WP47126 109 aa2.27□□□□□ -2.05
UBP1YDL122W YGR153WP48238 217 aa2.27□□□□□ -2.05
UBP1YDL122W NIT3P49954 291 aa2.27□□□□□ -2.05
UBP1YDL122W AIM14P53109 570 aa2.27□□□□□ -2.05
UBP1YDL122W VAC7P53950 1165 aa2.27□□□□□ -2.05
UBP1YDL122W ATP25Q03153 612 aa2.27□□□□□ -2.05
UBP1YDL122W SNU56Q03782 492 aaKnown RBP2.27□□□□□ -2.05
UBP1YDL122W YDR514CQ04408 483 aa2.27□□□□□ -2.05
UBP1YDL122W FUS2Q05670 677 aa2.27□□□□□ -2.05
UBP1YDL122W ATG33Q06485 197 aa2.27□□□□□ -2.05
UBP1YDL122W YDL144CQ07589 356 aa2.27□□□□□ -2.05
UBP1YDL122W ERP4Q12450 207 aa2.27□□□□□ -2.05
UBP1YDL122W NSI1Q12457 570 aa2.27□□□□□ -2.05
UBP1YDL122W RPL11BQ3E757 174 aaPredicted RBP2.27□□□□□ -2.05
UBP1YDL122W YOR111WQ99210 232 aa2.27□□□□□ -2.05
UBP1YDL122W INH1P01097 85 aa2.26□□□□□ -2.05
UBP1YDL122W ENA1P13587 1091 aa2.26□□□□□ -2.05
UBP1YDL122W SEC63P14906 663 aa2.26□□□□□ -2.05
UBP1YDL122W PDA1P16387 420 aaKnown RBP2.26□□□□□ -2.05
UBP1YDL122W APA1P16550 321 aaKnown RBP2.26□□□□□ -2.05
UBP1YDL122W DBF20P32328 564 aa2.26□□□□□ -2.05
UBP1YDL122W DAL3P32459 195 aa2.26□□□□□ -2.05
UBP1YDL122W PMT1P33775 817 aa2.26□□□□□ -2.05
UBP1YDL122W MNN4P36044 1178 aa2.26□□□□□ -2.05
UBP1YDL122W STT3P39007 718 aaKnown RBP2.26□□□□□ -2.05
UBP1YDL122W EMP65P40085 556 aa2.26□□□□□ -2.05
UBP1YDL122W ECL1P48235 211 aa2.26□□□□□ -2.05
UBP1YDL122W DIP5P53388 608 aa2.26□□□□□ -2.05
UBP1YDL122W COP1P53622 1201 aaKnown RBP2.26□□□□□ -2.05
UBP1YDL122W INN1P53901 409 aa2.26□□□□□ -2.05
UBP1YDL122W ENA2Q01896 1091 aa2.26□□□□□ -2.05
UBP1YDL122W YML131WQ03102 365 aa2.26□□□□□ -2.05
UBP1YDL122W AVO1Q08236 1176 aa2.26□□□□□ -2.05
UBP1YDL122W ENA5Q12691 1091 aa2.26□□□□□ -2.05
UBP1YDL122W HMG1P12683 1054 aa2.26□□□□□ -2.05
UBP1YDL122W HSC82P15108 705 aaKnown RBP2.26□□□□□ -2.05
UBP1YDL122W PHO81P17442 1178 aa2.26□□□□□ -2.05
UBP1YDL122W TPM1P17536 199 aaKnown RBP2.26□□□□□ -2.05
UBP1YDL122W BUD14P27637 709 aa2.26□□□□□ -2.05
UBP1YDL122W YIM1P28625 365 aa2.26□□□□□ -2.05
UBP1YDL122W HEM12P32347 362 aaPredicted RBP2.26□□□□□ -2.05
UBP1YDL122W GDA1P32621 518 aa2.26□□□□□ -2.05
UBP1YDL122W YSC83P32792 385 aa2.26□□□□□ -2.05
UBP1YDL122W MRP4P32902 394 aa2.26□□□□□ -2.05
UBP1YDL122W AFR1P33304 620 aa2.26□□□□□ -2.05
UBP1YDL122W CCT6P39079 546 aa2.26□□□□□ -2.05
UBP1YDL122W SLD3P53135 668 aa2.26□□□□□ -2.05
UBP1YDL122W YET2Q04210 160 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms