RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	GAL4	P04386	881 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	PDC1	P06169	563 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	KIN28	P06242	306 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	MTF2	P10849	440 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	FBA1	P14540	359 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	GID7	P25569	745 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	IMG1	P25626	169 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	MDJ1	P35191	511 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	MUD2	P36084	527 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	RRP3	P38712	501 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	RPH1	P39956	796 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	VAB2	P40003	282 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	MMF1	P40185	145 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	ATM1	P40416	690 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	ASG1	P40467	964 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	TDA10	P42938	290 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	YJR056C	P47115	236 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	HFM1	P51979	1187 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	GPG1	P53130	126 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	NSA1	P53136	463 aa	Predicted RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	YGR250C	P53316	781 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	BOP3	P53958	396 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	WAR1	Q03631	944 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	YMD8	Q03697	442 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	YDR514C	Q04408	483 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	RSF1	Q05043	376 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	THI7	Q05998	598 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	YPR147C	Q06522	304 aa	Known RBP	5.83	□□□□□ -1.48
SUB2	YDL084W	MUM3	Q08750	479 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	TGS1	Q12052	315 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	PSY3	Q12318	242 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	PNS1	Q12412	539 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	IRC20	Q06554	1556 aa		5.83	□□□□□ -1.48
SUB2	YDL084W	RPL25	P04456	142 aa	Known RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	HXK2	P04807	486 aa	Known RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	CHS2	P14180	963 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	CKA1	P15790	372 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	CBF1	P17106	351 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	RGR1	P19263	1082 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	DAL7	P21826	554 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	RPT5	P33297	434 aa	Known RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	SPC29	P33419	253 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	RFT1	P38206	574 aa	Predicted RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	FES1	P38260	290 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	SUL1	P38359	859 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	SER3	P40054	469 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	YMR134W	P40207	237 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	VHR1	P40522	640 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	IMA5	P40884	581 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	GLG2	P47011	380 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	YJR054W	P47114	497 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	ASK10	P48361	1146 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	MSE1	P48525	536 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	YGR122W	P53272	402 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	OGG1	P53397	376 aa	Predicted RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	MPP6	P53725	186 aa	Predicted RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	TIM10	P87108	93 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	OAZ1	Q02803	292 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	YPL071C	Q02864	156 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	ARG7	Q04728	441 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	MRX10	Q05648	414 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	SRO7	Q12038	1033 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	HFI1	Q12060	488 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	GET4	Q12125	312 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	NTO1	Q12311	748 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	ADE6	P38972	1358 aa	Known RBP	5.82	□□□□□ -1.48
SUB2	YDL084W	HSL1	P34244	1518 aa		5.82	□□□□□ -1.48
SUB2	YDL084W	PHO5	P00635	467 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	RPP2A	P05319	106 aa	Known RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	SPT3	P06844	337 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	VAS1	P07806	1104 aa	Known RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	FUM1	P08417	488 aa	Known RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	CYC8	P14922	966 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	CYM1	P32898	989 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	SRP102	P36057	244 aa	Predicted RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	GLG1	P36143	616 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	UBX7	P38349	436 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	ACO2	P39533	789 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	AIM2	P39721	246 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	FMS1	P50264	508 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	YGL204C	P53089	101 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	ART5	P53244	586 aa	Known RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	PUS6	P53294	404 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	YAP6	Q03935	383 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	RSM24	Q03976	319 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	PEX12	Q04370	399 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	SWF1	Q04629	336 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	RGC1	Q06108	1083 aa	Known RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	YLR456W	Q06199	204 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	YPQ2	Q06328	317 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	YLR413W	Q06689	675 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	YOL019W	Q08157	551 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	GAS4	Q08271	471 aa		5.81	□□□□□ -1.48
SUB2	YDL084W	MDM20	Q12387	796 aa	Known RBP	5.81	□□□□□ -1.48
SUB2	YDL084W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
SUB2	YDL084W	RPS6A	P0CX37	236 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	RPS6B	P0CX38	236 aa	Predicted RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	SRB2	P34162	210 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	VPS21	P36017	210 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	GPT2	P36148	743 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms