RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNE1	YAL058W	MZM1	Q03429	123 aa	Predicted RBP	6.09	□□□□□ -1.44
CNE1	YAL058W	TIF35	Q04067	274 aa	Known RBP	6.09	□□□□□ -1.44
CNE1	YAL058W	TAF11	Q04226	346 aa		6.09	□□□□□ -1.44
CNE1	YAL058W	GLO2	Q05584	274 aa		6.09	□□□□□ -1.44
CNE1	YAL058W	YIG1	Q08956	461 aa		6.09	□□□□□ -1.44
CNE1	YAL058W	HRT3	Q12347	344 aa		6.09	□□□□□ -1.44
CNE1	YAL058W	SEM1	O94742	89 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	CHS1	P08004	1131 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	MAS1	P10507	462 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	HSF1	P10961	833 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	YPK1	P12688	680 aa	Known RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	STE6	P12866	1290 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	DPB2	P24482	689 aa	Predicted RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	RAD27	P26793	382 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	HSP78	P33416	811 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	DEF1	P35732	738 aa	Known RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	ATG12	P38316	186 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	CRP1	P38845	465 aa	Known RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	LYS9	P38999	446 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	NUP60	P39705	539 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	GEM1	P39722	662 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	BFA1	P47113	574 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	RFX1	P48743	811 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	VMA10	P48836	114 aa	Known RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	YGR127W	P53275	312 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	SLG1	P54867	378 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
CNE1	YAL058W	NAN1	Q02931	896 aa	Known RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	SPC2	Q04969	178 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	TPO1	Q07824	586 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	FMP25	Q08023	583 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	CHS5	Q12114	671 aa	Known RBP	6.08	□□□□□ -1.44
CNE1	YAL058W	LDB17	Q12342	491 aa		6.08	□□□□□ -1.44
CNE1	YAL058W	CAR1	P00812	333 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	RHO2	P06781	192 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	MOD5	P07884	428 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	SEC63	P14906	663 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	URE2	P23202	354 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	CNA1	P23287	553 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	YCL068C	P25593	260 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	PMI40	P29952	429 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	KAR9	P32526	644 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	PEP12	P32854	288 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	TIF3	P34167	436 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	YKR015C	P36111	568 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	SHE3	P38272	425 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	OTU2	P38747	307 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	BZZ1	P38822	633 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	AIM18	P38884	321 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	SNL1	P40548	159 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	IML2	P47031	731 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	YJR054W	P47114	497 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	TRF5	P48561	642 aa	Known RBP	6.07	□□□□□ -1.44
CNE1	YAL058W	SFB2	P53953	876 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	CDC123	Q05791	360 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	SLD7	Q08457	257 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
CNE1	YAL058W	NTO1	Q12311	748 aa		6.07	□□□□□ -1.44
CNE1	YAL058W	PEX1	P24004	1043 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	PGS1	P25578	521 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	HRR25	P29295	494 aa	Known RBP	6.06	□□□□□ -1.44
CNE1	YAL058W	PTC1	P35182	281 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	SPC42	P36094	363 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	GIP1	P38229	639 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	YHI9	P38765	294 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	PPE1	P38796	400 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	PEX28	P38848	579 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	MOB1	P40484	314 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	MRK1	P50873	501 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	AIF1	P52923	378 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	CUS2	P53830	285 aa	Predicted RBP	6.06	□□□□□ -1.44
CNE1	YAL058W	REX2	P54964	269 aa	Known RBP	6.06	□□□□□ -1.44
CNE1	YAL058W	TMA20	P89886	181 aa	Predicted RBP	6.06	□□□□□ -1.44
CNE1	YAL058W	TFB3	Q03290	321 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	YMR155W	Q03795	547 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	PEX15	Q08215	383 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	THI20	Q08224	551 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	CIR2	Q08822	631 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	YOR342C	Q12182	319 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	APM4	Q99186	491 aa		6.06	□□□□□ -1.44
CNE1	YAL058W	CDC4	P07834	779 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	SPE1	P08432	466 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	INO1	P11986	533 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	HSC82	P15108	705 aa	Known RBP	6.05	□□□□□ -1.44
CNE1	YAL058W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	6.05	□□□□□ -1.44	not detected
CNE1	YAL058W	SLY41	P22215	453 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	AMD2	P22580	549 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	RIM1	P32445	135 aa	Known RBP	6.05	□□□□□ -1.44
CNE1	YAL058W	AEP1	P32493	518 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	BEM3	P32873	1128 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	KAP104	P38217	918 aa	Known RBP	6.05	□□□□□ -1.44
CNE1	YAL058W	SIT1	P39980	628 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	YAT2	P40017	923 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	UBP7	P40453	1071 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	CAB2	P40506	365 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	RBL2	P48606	106 aa	Known RBP	6.05	□□□□□ -1.44
CNE1	YAL058W	YNR014W	P53719	212 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	YNL058C	P53947	316 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	HED1	Q03937	162 aa		6.05	□□□□□ -1.44
CNE1	YAL058W	CSN9	Q03981	162 aa		6.05	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms