RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	TFB2	Q02939	513 aa		13.46	□□□□□ -0.25
SSA1	YAL005C	SYT1	Q06836	1226 aa		13.46	□□□□□ -0.25
SSA1	YAL005C	YMR030W-A	Q3E760	96 aa		13.46	□□□□□ -0.25
SSA1	YAL005C	OAF1	P39720	1047 aa	Predicted RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	SSP120	P39931	234 aa	Known RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	PEP8	P40335	379 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	SEC27	P41811	889 aa	Known RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	LSB3	P43603	459 aa	Known RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	PET117	Q02771	107 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	GSF2	Q04697	403 aa	Known RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	EMC1	P25574	760 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	HRR25	P29295	494 aa	Known RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	YBR032W	P38223	100 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	SER33	P40510	469 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	DSN1	P40568	576 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	YNR014W	P53719	212 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	BIO5	P53744	561 aa	Known RBP	13.45	□□□□□ -0.26
SSA1	YAL005C	PEX13	P80667	386 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	YMR209C	Q03648	457 aa		13.45	□□□□□ -0.26
SSA1	YAL005C	BEM2	P39960	2167 aa	Known RBP	13.44	□□□□□ -0.26
SSA1	YAL005C	CET1	O13297	549 aa	Predicted RBP	13.44	□□□□□ -0.26
SSA1	YAL005C	MPH2	P0CD99	609 aa		13.44	□□□□□ -0.26
SSA1	YAL005C	ARP1	P38696	384 aa		13.44	□□□□□ -0.26
SSA1	YAL005C	SPC105	P53148	917 aa		13.44	□□□□□ -0.26
SSA1	YAL005C	YNL143C	P53908	130 aa		13.44	□□□□□ -0.26
SSA1	YAL005C	KCS1	Q12494	1050 aa		13.44	□□□□□ -0.26
SSA1	YAL005C	PYC2	P32327	1180 aa	Known RBP	13.43	□□□□□ -0.26
SSA1	YAL005C	YJL206C	P39529	758 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	ADE12	P80210	433 aa	Known RBP	13.43	□□□□□ -0.26
SSA1	YAL005C	ADY3	Q07732	790 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	YCR099C	P25657	155 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	KIP2	P28743	706 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	MRPL9	P31334	269 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	RIM1	P32445	135 aa	Known RBP	13.43	□□□□□ -0.26
SSA1	YAL005C	GCD11	P32481	527 aa	Known RBP	13.43	□□□□□ -0.26
SSA1	YAL005C	DSF2	P38213	736 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	PFK26	P40433	827 aa	Known RBP	13.43	□□□□□ -0.26
SSA1	YAL005C	LIA1	P47120	325 aa	Known RBP	13.43	□□□□□ -0.26
SSA1	YAL005C	UBX4	P54730	416 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	YDR109C	Q04585	715 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	YOR338W	Q99326	363 aa		13.43	□□□□□ -0.26
SSA1	YAL005C	SLD2	P34252	453 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	LDB7	P38210	180 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	MNN1	P39106	762 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	ACO2	P39533	789 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	YGL140C	P53120	1219 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	NPY1	P53164	384 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	YPR084W	Q06821	456 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	RGS2	Q99188	309 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	FRT1	Q99332	602 aa		13.42	□□□□□ -0.26
SSA1	YAL005C	STE2	D6VTK4	431 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	SPS1	P08458	490 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	BRF1	P29056	596 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	RRP14	P36080	434 aa	Known RBP	13.41	□□□□□ -0.26
SSA1	YAL005C	MAK5	P38112	773 aa	Predicted RBP	13.41	□□□□□ -0.26
SSA1	YAL005C	LIN1	P38852	340 aa	Predicted RBP	13.41	□□□□□ -0.26
SSA1	YAL005C	ALG8	P40351	577 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	TRS85	P46944	698 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	GUT1	P32190	709 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	GUT2	P32191	649 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	FRE4	P53746	719 aa		13.41	□□□□□ -0.26
SSA1	YAL005C	TDA7	P53882	636 aa	Predicted RBP	13.41	□□□□□ -0.26
SSA1	YAL005C	YMR178W	Q03219	274 aa	Known RBP	13.41	□□□□□ -0.26
SSA1	YAL005C	RPC11	Q04307	110 aa	Predicted RBP	13.41	□□□□□ -0.26
SSA1	YAL005C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	13.4	□□□□□ -0.26	not detected
SSA1	YAL005C	MSH2	P25847	964 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	MCM5	P29496	775 aa	Known RBP	13.4	□□□□□ -0.26
SSA1	YAL005C	DCW1	P36091	449 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	YBR259W	P38338	688 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	LEM3	P42838	414 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	ARH1	P48360	493 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	COG7	P53195	279 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	HEL2	Q05580	639 aa	Known RBP	13.4	□□□□□ -0.26
SSA1	YAL005C	YLR177W	Q06251	628 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	ERP4	Q12450	207 aa		13.4	□□□□□ -0.26
SSA1	YAL005C	PHO3	P24031	467 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	SPT23	P35210	1082 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	VPS41	P38959	992 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	TIM17	P39515	158 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	GDH3	P39708	457 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	GTS1	P40956	396 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	SET2	P46995	733 aa	Known RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	ARP4	P80428	489 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	PPN1	Q04119	674 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	HRK1	Q08732	759 aa	Known RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	NUS1	Q12063	375 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	MEX67	Q99257	599 aa	Known RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	RPS9A	O13516	197 aa	Known RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	AMD2	P22580	549 aa		13.39	□□□□□ -0.27
SSA1	YAL005C	SRP72	P38688	640 aa	Known RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	PAN2	P53010	1115 aa	Predicted RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	CHS5	Q12114	671 aa	Known RBP	13.39	□□□□□ -0.27
SSA1	YAL005C	YMR085W	P0CF18	432 aa		13.38	□□□□□ -0.27
SSA1	YAL005C	AAD3	P25612	363 aa		13.38	□□□□□ -0.27
SSA1	YAL005C	PMT1	P33775	817 aa		13.38	□□□□□ -0.27
SSA1	YAL005C	LRP1	P38801	184 aa	Known RBP	13.38	□□□□□ -0.27
SSA1	YAL005C	MGS1	P40151	587 aa		13.38	□□□□□ -0.27
SSA1	YAL005C	YDR131C	Q03899	556 aa		13.38	□□□□□ -0.27
SSA1	YAL005C	CSN9	Q03981	162 aa		13.38	□□□□□ -0.27
SSA1	YAL005C	TAF11	Q04226	346 aa		13.38	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms