RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PIK3AP1Q6ZUJ8 805 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 TMC6Q7Z403 805 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 DGKHQ86XP1 1220 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
PHGDH-229ENST00000641891 PRIMPOLQ96LW4 560 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 C16orf45Q96MC5 204 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-229ENST00000641891 SKILP12757 684 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 KIF5BP33176 963 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 RASGRP2Q7LDG7 609 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 AMOTL1Q8IY63 956 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 ELOA2Q8IYF1 753 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-229ENST00000641891 DPF2Q92785 391 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 DHX58Q96C10 678 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 RASA1P20936 1047 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 SLC35G1Q2M3R5 365 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 MFSD14BQ5SR56 506 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 TEX11Q8IYF3 940 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 SYMPKQ92797 1274 aaKnown RBP19.39■□□□□ 0.69
PHGDH-229ENST00000641891 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 HOOK1Q9UJC3 728 aaKnown RBP19.39■□□□□ 0.69
PHGDH-229ENST00000641891 USP27XA6NNY8 438 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 C6orf229H3BNL8 230 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 BBOX1O75936 387 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 ZNF444Q8N0Y2 327 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-229ENST00000641891 PROM2Q8N271 834 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 TSC1Q92574 1164 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 ANKS1AQ92625 1134 aa19.39■□□□□ 0.69
PHGDH-229ENST00000641891 OSBPL5Q9H0X9 879 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-229ENST00000641891 DDX60LQ5H9U9 1706 aaKnown RBP19.39■□□□□ 0.69
PHGDH-229ENST00000641891 SNED1Q8TER0 1413 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 GPR75-ASB3A0A0A6YYF3 556 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 NEMFO60524 1076 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 HOXA10P31260 410 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-229ENST00000641891 SARSP49591 514 aaKnown RBP19.38■□□□□ 0.69
PHGDH-229ENST00000641891 PTGDRQ13258 359 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 GRM4Q14833 912 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 KRT27Q7Z3Y8 459 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 SMARCE1Q969G3 411 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 FANCLQ9NW38 375 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 PODXL2Q9NZ53 605 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 MORC2Q9Y6X9 1032 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-229ENST00000641891 FLT1P17948 1338 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 FAM205AQ6ZU69 1335 aa19.38■□□□□ 0.69
PHGDH-229ENST00000641891 IGSF3O75054 1194 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■■□□ 15
PHGDH-229ENST00000641891 HSP90AA4PQ58FG1 418 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 NT5DC1Q5TFE4 455 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 ARMCX5Q6P1M9 558 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 STX8Q9UNK0 236 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 LTBP1Q14766 1721 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 VWA3AA6NCI4 1184 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 DYNC1I1O14576 645 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 CASP1P29466 404 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 RHBDL3P58872 404 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 MORC3Q14149 939 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 PTPN21Q16825 1174 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 TYW1BQ6NUM6 668 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 RASGRP4Q8TDF6 673 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 IMPACTQ9P2X3 320 aa19.37■□□□□ 0.69
PHGDH-229ENST00000641891 RIMBP2O15034 1052 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 MCM7P33993 719 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 AFMP43652 599 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 CDK8P49336 464 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 ATP2C1P98194 919 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-229ENST00000641891 TXNRD1Q16881 649 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 TPD52L1Q16890 204 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-229ENST00000641891 FERMT2Q96AC1 680 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 CRAMP1Q96RY5 1269 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 TCP11L1Q9NUJ3 509 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-229ENST00000641891 CYTH3O43739 400 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 SERPINC1P01008 464 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 GOLGA8HP0CJ92 632 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 GSDMDP57764 484 aa19.36■□□□□ 0.69
PHGDH-229ENST00000641891 TRMT44Q8IYL2 757 aaKnown RBP19.36■□□□□ 0.69
PHGDH-229ENST00000641891 BMP15O95972 392 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 UBASH3AP57075 661 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 IL17AQ16552 155 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 C16orf86Q6ZW13 317 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 CPVLQ9H3G5 476 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 LRRC37AA6NMS7 1700 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 ANKRD31Q8N7Z5 1873 aa19.35■□□□□ 0.69
PHGDH-229ENST00000641891 KLRG2A4D1S0 409 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-229ENST00000641891 RIOK3O14730 519 aaKnown RBP19.34■□□□□ 0.69
PHGDH-229ENST00000641891 GTF2IP78347 998 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 BLIDQ8IZY5 108 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 PAGE5Q96GU1 130 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 EYA3Q99504 573 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 TMEM232C9JQI7 657 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 TNNT1P13805 278 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 WWC2Q6AWC2 1192 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 KANK3Q6NY19 840 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 SPATA20Q8TB22 786 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 MED15Q96RN5 788 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 GAKO14976 1311 aa19.34■□□□□ 0.69
PHGDH-229ENST00000641891 SLFN14P0C7P3 912 aa19.33■□□□□ 0.69
PHGDH-229ENST00000641891 CFAP100Q494V2 611 aa19.33■□□□□ 0.69
PHGDH-229ENST00000641891 TRMT1Q9NXH9 659 aaKnown RBP19.33■□□□□ 0.69
PHGDH-229ENST00000641891 PCDHA4Q9UN74 947 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms