RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 APPBP2Q92624 585 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 IRAK4Q9NWZ3 460 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 ZNF532Q9HCE3 1301 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 TMEM232C9JQI7 657 aa13.4□□□□□ -0.27
RBFOX1-224ENST00000641259 CTAGE5O15320 804 aa13.4□□□□□ -0.27
RBFOX1-224ENST00000641259 CCDC114Q96M63 670 aa13.4□□□□□ -0.27
RBFOX1-224ENST00000641259 USP28Q96RU2 1077 aa13.4□□□□□ -0.27
RBFOX1-224ENST00000641259 GOLGA6CA6NDK9 693 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 GPAA1O43292 621 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 GOLGA6DP0CG33 693 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 TXNRD1Q16881 649 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 GOLGA6AQ9NYA3 693 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 MYBL1P10243 752 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 PDE6AP16499 860 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 IQCB1Q15051 598 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 HOOK1Q9UJC3 728 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 DENND2AQ9ULE3 1009 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 UTRNP46939 3433 aa13.39□□□□□ -0.27
RBFOX1-224ENST00000641259 GOLGA6L7A0A1B0GV03 622 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 STX17P56962 302 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 HAND2P61296 217 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 ENO4A6NNW6 628 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 CBFA2T2O43439 604 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 ARMC3Q5W041 872 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 CAVIN2O95810 425 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 FGAP02671 866 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 CCDC148Q8NFR7 591 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 MRPS27Q92552 414 aaKnown RBP13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 RABGGTAQ92696 567 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 PSMB7Q99436 277 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 GUCA1BQ9UMX6 200 aa13.38□□□□□ -0.27
RBFOX1-224ENST00000641259 E7EWF7 191 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 UQCRFS1P1P0C7P4 283 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 ADGRA1Q86SQ6 560 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 L2HGDHQ9H9P8 463 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 RGS17Q9UGC6 210 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 ENC1O14682 589 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 ZFYP08048 801 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 RPS8P62241 208 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 DDR1Q08345 913 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 MTF1Q14872 753 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 MAGEB6Q8N7X4 407 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 CCDC151A5D8V7 595 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 VSNL1P62760 191 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 DPF2Q92785 391 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 PCMTD1Q96MG8 357 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
RBFOX1-224ENST00000641259 Q6ZUG5 572 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 EZRP15311 586 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 TTF1Q15361 905 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 FAM84BQ96KN1 310 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 TACO1Q9BSH4 297 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 TNS1Q9HBL0 1735 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 HGSO14964 777 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 COBLO75128 1261 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 ADRA2BP18089 450 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 NEDD9Q14511 834 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 ODF2Q5BJF6 829 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 CCDC70Q6NSX1 233 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 IGSF22Q8N9C0 903 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 CABS1Q96KC9 395 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 TFCP2L1Q9NZI6 479 aa13.36□□□□□ -0.27
RBFOX1-224ENST00000641259 CCDC175P0C221 793 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 HPDP32754 393 aaPredicted RBP13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 STIM1Q13586 685 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 BRD3Q15059 726 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 AP1ARQ63HQ0 302 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 ZNF384Q8TF68 577 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 PNKPQ96T60 521 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 G3BP2Q9UN86 482 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 CACNA1SQ13698 1873 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 IRS2Q9Y4H2 1338 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms