RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 BTAF1O14981 1849 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 LAMB1P07942 1786 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 VWA3AA6NCI4 1184 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 CALM1P0DP23 149 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 CALM2P0DP24 149 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 CALM3P0DP25 149 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 XBP1P17861 261 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 STX17P56962 302 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 TBX2Q13207 712 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 PTGDRQ13258 359 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 SBK1Q52WX2 424 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 TPTE2Q6XPS3 522 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 PIK3AP1Q6ZUJ8 805 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 STAG2Q8N3U4 1231 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 ENOX1Q8TC92 643 aaKnown RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 ATP8A2Q9NTI2 1148 aa10.68□□□□□ -0.7
NECAP1-225ENST00000640209 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
NECAP1-225ENST00000640209 SCG2P13521 617 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 CBX1P83916 185 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 DPYDQ12882 1025 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 REXO1L1PQ8IX06 675 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 SLC44A5Q8NCS7 719 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 CTCFLQ8NI51 663 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 KIF18AQ8NI77 898 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 RASGRP4Q8TDF6 673 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 GPKOWQ92917 476 aaPredicted RBP eCLIP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 HOOK1Q9UJC3 728 aaKnown RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 FAM205AQ6ZU69 1335 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 USP17L3A6NCW0 530 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 USP17L4A6NCW7 530 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 SLFN14P0C7P3 912 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 KCNJ6P48051 423 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 PLCD1P51178 756 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 ADKP55263 362 aaKnown RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 ATP2C1P98194 919 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 TFAP4Q01664 338 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 SYCP1Q15431 976 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 KLHL10Q6JEL2 608 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 TYW1BQ6NUM6 668 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 USP17L1Q7RTZ2 530 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 APTXQ7Z2E3 356 aaKnown RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 DZIP1Q86YF9 867 aaKnown RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 PRDM10Q9NQV6 1147 aa10.67□□□□□ -0.7
NECAP1-225ENST00000640209 ARPP21Q9UBL0 812 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 RTCBQ9Y3I0 505 aaKnown RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-225ENST00000640209 SBF2Q86WG5 1849 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 TEX33O43247 280 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 MCM7P33993 719 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 NLRP5P59047 1200 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 CUL4BQ13620 913 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 PFKFB3Q16875 520 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-225ENST00000640209 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 TRIM65Q6PJ69 517 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 MTRQ99707 1265 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 BLZF1Q9H2G9 400 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 XDHP47989 1333 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 RGL2O15211 777 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 CDC25AP30304 524 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 KANK3Q6NY19 840 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 TC2NQ8N9U0 490 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 TRIML1Q8N9V2 468 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 FERMT2Q96AC1 680 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 ANKIB1Q9P2G1 1089 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
NECAP1-225ENST00000640209 MAST2Q6P0Q8 1798 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 MYO1BO43795 1136 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 NR1I3Q14994 352 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 ELF2Q15723 593 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 E2F4Q16254 413 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 C4orf32Q8N8J7 132 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 L2HGDHQ9H9P8 463 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 BRMS1Q9HCU9 246 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 SAP30BPQ9UHR5 308 aaKnown RBP10.65□□□□□ -0.7
NECAP1-225ENST00000640209 CCDC88AQ3V6T2 1871 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 NPHP1O15259 732 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 USP5P45974 858 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 TOGARAM2Q6ZUX3 1019 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 TGFBRAP1Q8WUH2 860 aa10.65□□□□□ -0.7
NECAP1-225ENST00000640209 CYTH3O43739 400 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 LDHBP07195 334 aaKnown RBP10.64□□□□□ -0.71
NECAP1-225ENST00000640209 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-225ENST00000640209 GRAPQ13588 217 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 SPECC1LQ69YQ0 1117 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 PDXDC2PQ6P474 469 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 GRAPLQ8TC17 118 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-225ENST00000640209 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 KAT14Q9H8E8 782 aa10.64□□□□□ -0.71
NECAP1-225ENST00000640209 DACH1Q9UI36 760 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms