RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 ZDHHC15Q96MV8 337 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 RCAN1P53805 252 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 NTRK3Q16288 839 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 ZNF444Q8N0Y2 327 aaPredicted RBP12.06□□□□□ -0.48
PAX6-235ENST00000638629 DDX4Q9NQI0 724 aaKnown RBP12.06□□□□□ -0.48
PAX6-235ENST00000638629 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 NID2Q14112 1375 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 NMT2O60551 498 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 KIF20AO95235 890 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 CDK8P49336 464 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 RBM5P52756 815 aaKnown RBP eCLIP12.06□□□□□ -0.48
PAX6-235ENST00000638629 RTN1Q16799 776 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 ZNF287Q9HBT7 754 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
PAX6-235ENST00000638629 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
PAX6-235ENST00000638629 SKILP12757 684 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 FANCBQ8NB91 859 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 LINC00301Q8NCQ3 95 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 MYH1P12882 1939 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 ADAMTSL1Q8N6G6 1762 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
PAX6-235ENST00000638629 PTGER2P43116 358 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 ME1P48163 572 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 CBX1P83916 185 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 PTPN14Q15678 1187 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 CATIPQ7Z7H3 387 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 CCDC150Q8NCX0 1101 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 PHKBQ93100 1093 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 PCDHA7Q9UN72 937 aa12.05□□□□□ -0.48
PAX6-235ENST00000638629 FOCADQ5VW36 1801 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 CCDC196A0A1B0GTZ2 297 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 RAD17O75943 681 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 RASA1P20936 1047 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 GUCY1B3Q02153 619 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
PAX6-235ENST00000638629 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
PAX6-235ENST00000638629 VIL1P09327 827 aaKnown RBP12.04□□□□□ -0.48
PAX6-235ENST00000638629 TSPY3P0CV98 308 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 TSPY8P0CW00 308 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 IFNAR1P17181 557 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 CEBPZQ03701 1054 aaKnown RBP12.04□□□□□ -0.48
PAX6-235ENST00000638629 SSRP1Q08945 709 aaKnown RBP12.04□□□□□ -0.48
PAX6-235ENST00000638629 RSBN1LQ6PCB5 846 aaPredicted RBP12.04□□□□□ -0.48
PAX6-235ENST00000638629 C8orf76Q96K31 380 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 ARID3AQ99856 593 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
PAX6-235ENST00000638629 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
PAX6-235ENST00000638629 PSMD14O00487 310 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.48
PAX6-235ENST00000638629 PPP2R5BQ15173 497 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 OTUD7BQ6GQQ9 843 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 NIM1KQ8IY84 436 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 ERO1AQ96HE7 468 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 DDX41Q9UJV9 622 aaKnown RBP12.03□□□□□ -0.48
PAX6-235ENST00000638629 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 COL4A5P29400 1685 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
PAX6-235ENST00000638629 CALM1P0DP23 149 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 CALM2P0DP24 149 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 CALM3P0DP25 149 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 GABPB1Q06547 395 aaPredicted RBP12.03□□□□□ -0.48
PAX6-235ENST00000638629 TROAPQ12815 778 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 NFIAQ12857 509 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 NBPF11Q86T75 865 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 DGKHQ86XP1 1220 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 ALG1Q9BT22 464 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 SLC26A6Q9BXS9 759 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 MYO3BQ8WXR4 1341 aa12.03□□□□□ -0.48
PAX6-235ENST00000638629 DDAH1O94760 285 aa12.02□□□□□ -0.48
PAX6-235ENST00000638629 TPM4P67936 248 aa12.02□□□□□ -0.48
PAX6-235ENST00000638629 CFAP100Q494V2 611 aa12.02□□□□□ -0.48
PAX6-235ENST00000638629 AOPEPQ8N6M6 819 aa12.02□□□□□ -0.48
PAX6-235ENST00000638629 ZNF397Q8NF99 534 aaPredicted RBP12.02□□□□□ -0.48
PAX6-235ENST00000638629 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.48
PAX6-235ENST00000638629 BCS1LQ9Y276 419 aa12.02□□□□□ -0.48
PAX6-235ENST00000638629 MORC2Q9Y6X9 1032 aaPredicted RBP12.02□□□□□ -0.48
PAX6-235ENST00000638629 STK36Q9NRP7 1315 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 IKBKBO14920 756 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 CACNB3P54284 484 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 GABPAQ06546 454 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 CMTR1Q8N1G2 835 aaKnown RBP12.02□□□□□ -0.49
PAX6-235ENST00000638629 CRACR2BQ8N4Y2 399 aaPredicted RBP12.02□□□□□ -0.49
PAX6-235ENST00000638629 KIF18AQ8NI77 898 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 AIFM3Q96NN9 605 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 IDI2Q9BXS1 227 aa12.02□□□□□ -0.49
PAX6-235ENST00000638629 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms