RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 NAPBQ9H115 298 aa14.95□□□□□ -0.02
GFAP-227ENST00000638400 HELLSQ9NRZ9 838 aa14.95□□□□□ -0.02
GFAP-227ENST00000638400 BIN2Q9UBW5 565 aaPredicted RBP14.95□□□□□ -0.02
GFAP-227ENST00000638400 TMX2Q9Y320 296 aa14.95□□□□□ -0.02
GFAP-227ENST00000638400 RABGAP1Q9Y3P9 1069 aa14.95□□□□□ -0.02
GFAP-227ENST00000638400 PEX10O60683 326 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 RASA1P20936 1047 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 MAPK4P31152 587 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 UBXN2AP68543 259 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 ATP2B2Q01814 1243 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 C8orf34Q49A92 452 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 LBX2Q6XYB7 198 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 SIAH1Q8IUQ4 282 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 PLEKHM2Q8IWE5 1019 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
GFAP-227ENST00000638400 STK11IPQ8N1F8 1099 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 PXYLP1Q8TE99 480 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 OSBPL3Q9H4L5 887 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 VCPKMTQ9H867 229 aa14.94□□□□□ -0.02
GFAP-227ENST00000638400 SPDYE16A6NNV3 312 aaPredicted RBP14.93□□□□□ -0.02
GFAP-227ENST00000638400 TRIM6-TRIM34B2RNG4 842 aa14.93□□□□□ -0.02
GFAP-227ENST00000638400 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
GFAP-227ENST00000638400 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
GFAP-227ENST00000638400 ELNP15502 786 aa14.93□□□□□ -0.02
GFAP-227ENST00000638400 CCNA1P78396 465 aa14.93□□□□□ -0.02
GFAP-227ENST00000638400 POTEEQ6S8J3 1075 aa14.93□□□□□ -0.02
GFAP-227ENST00000638400 CCDC129Q6ZRS4 1044 aa14.93□□□□□ -0.02
GFAP-227ENST00000638400 SOCS4Q8WXH5 440 aa14.93□□□□□ -0.02
GFAP-227ENST00000638400 BAZ2AQ9UIF9 1905 aaKnown RBP14.92□□□□□ -0.02
GFAP-227ENST00000638400 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 WDR46O15213 610 aaKnown RBP14.92□□□□□ -0.02
GFAP-227ENST00000638400 CNMDO75829 334 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 PDE4BQ07343 736 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 PPARAQ07869 468 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 COG2Q14746 738 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 MTFR1Q15390 333 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 KIAA1755Q5JYT7 1200 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 FAM227BQ96M60 508 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.92□□□□□ -0.02
GFAP-227ENST00000638400 PORCNQ9H237 461 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
GFAP-227ENST00000638400 GOPCQ9HD26 462 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 HOXC10Q9NYD6 342 aa14.92□□□□□ -0.02
GFAP-227ENST00000638400 FOXP2O15409 715 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 PRDM1O75626 825 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 INHAP05111 366 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 CCL5P13501 91 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 EN2P19622 333 aaPredicted RBP14.91□□□□□ -0.02
GFAP-227ENST00000638400 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
GFAP-227ENST00000638400 Q3C1V9 767 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 MCMDC2Q4G0Z9 681 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 PLEKHH3Q7Z736 793 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 ZNF444Q8N0Y2 327 aaPredicted RBP14.91□□□□□ -0.02
GFAP-227ENST00000638400 GJD2Q9UKL4 321 aa14.91□□□□□ -0.02
GFAP-227ENST00000638400 BRCA2P51587 3418 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 FLOT1O75955 427 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 HMGCRP04035 888 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 VPS53Q5VIR6 699 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 GPR142Q7Z601 462 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 MB21D1Q8N884 522 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 NKX2-3Q8TAU0 364 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 NUDT12Q9BQG2 462 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 RNF208Q9H0X6 261 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 NYAP2Q9P242 653 aa14.9□□□□□ -0.02
GFAP-227ENST00000638400 PLIN4Q96Q06 1357 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 RBBP6Q7Z6E9 1792 aaKnown RBP14.89□□□□□ -0.03
GFAP-227ENST00000638400 IGKV6D-41A0A0C4DH26 115 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 RAD21O60216 631 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 GJB1P08034 283 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 DSG3P32926 999 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 ALX1Q15699 326 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 UNC93B1Q9H1C4 597 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 SYNPO2Q9UMS6 1093 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 KIAA0100Q14667 2235 aaKnown RBP14.89□□□□□ -0.03
GFAP-227ENST00000638400 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
GFAP-227ENST00000638400 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
GFAP-227ENST00000638400 SDSP20132 328 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 RGS2P41220 211 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 MFAP1P55081 439 aaKnown RBP14.88□□□□□ -0.03
GFAP-227ENST00000638400 MORN1Q5T089 497 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 WDR78Q5VTH9 848 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 ZNF589Q86UQ0 364 aaPredicted RBP14.88□□□□□ -0.03
GFAP-227ENST00000638400 TRMT44Q8IYL2 757 aaKnown RBP14.88□□□□□ -0.03
GFAP-227ENST00000638400 NEDD1Q8NHV4 660 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 CEP95Q96GE4 821 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 APBA2Q99767 749 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 DIAPH3Q9NSV4 1193 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 ANAPC4Q9UJX5 808 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
GFAP-227ENST00000638400 IVNS1ABPQ9Y6Y0 642 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
GFAP-227ENST00000638400 MGAMO43451 1857 aa14.87□□□□□ -0.03
GFAP-227ENST00000638400 TNRC18O15417 2968 aaPredicted RBP14.87□□□□□ -0.03
GFAP-227ENST00000638400 HIP1O00291 1037 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms