RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 BAZ2BQ9UIF8 2168 aaKnown RBP24.61■■□□□ 1.53
CLN6-224ENST00000638076 LMOD1P29536 600 aaPredicted RBP24.61■■□□□ 1.53
CLN6-224ENST00000638076 ZNF174Q15697 407 aa24.61■■□□□ 1.53
CLN6-224ENST00000638076 TEX11Q8IYF3 940 aa24.61■■□□□ 1.53
CLN6-224ENST00000638076 STAG2Q8N3U4 1231 aa24.61■■□□□ 1.53
CLN6-224ENST00000638076 BMP15O95972 392 aa24.6■■□□□ 1.53
CLN6-224ENST00000638076 TTC38Q5R3I4 469 aa24.6■■□□□ 1.53
CLN6-224ENST00000638076 BRWD3Q6RI45 1802 aa24.6■■□□□ 1.53
CLN6-224ENST00000638076 RASA1P20936 1047 aa24.6■■□□□ 1.53
CLN6-224ENST00000638076 HSD3B7Q9H2F3 369 aa24.6■■□□□ 1.53
CLN6-224ENST00000638076 PPEF1O14829 653 aaPredicted RBP24.59■■□□□ 1.53
CLN6-224ENST00000638076 ACTN4O43707 911 aaKnown RBP24.59■■□□□ 1.53
CLN6-224ENST00000638076 NEMFO60524 1076 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 PRR29P0C7W0 189 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 BMP6P22004 513 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 MYL5Q02045 173 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 GRM4Q14833 912 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 PIK3AP1Q6ZUJ8 805 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 GRAMD1CQ8IYS0 662 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 TBC1D22AQ8WUA7 517 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 MAD2L2Q9UI95 211 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 STX8Q9UNK0 236 aa24.59■■□□□ 1.53
CLN6-224ENST00000638076 PLCG2P16885 1265 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 FERMT2Q96AC1 680 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 EPSTI1Q96J88 318 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 ZNF287Q9HBT7 754 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 MAN1B1Q9UKM7 699 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 FLT1P17948 1338 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 KANK3Q6NY19 840 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 SLF2Q8IX21 1173 aa24.58■■□□□ 1.53
CLN6-224ENST00000638076 FAM163AQ96GL9 167 aaPredicted RBP24.58■■□□□ 1.53
CLN6-224ENST00000638076 ADAMTS3O15072 1205 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 RHBDL3P58872 404 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 NT5DC1Q5TFE4 455 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 SP8Q8IXZ3 490 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 PRIMPOLQ96LW4 560 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 MTMR7Q9Y216 660 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 ATP1A3P13637 1013 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 CDK8P49336 464 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 GNAQP50148 359 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 FANCCQ00597 558 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 C16orf86Q6ZW13 317 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 TMC4Q7Z404 712 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 GPKOWQ92917 476 aaPredicted RBP eCLIP24.57■■□□□ 1.52
CLN6-224ENST00000638076 SMARCE1Q969G3 411 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 TMEM47Q9BQJ4 181 aa24.57■■□□□ 1.52
CLN6-224ENST00000638076 A0A087X0B3 334 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 SARSP49591 514 aaKnown RBP24.56■■□□□ 1.52
CLN6-224ENST00000638076 PTGDRQ13258 359 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 SYMPKQ92797 1274 aaKnown RBP24.56■■□□□ 1.52
CLN6-224ENST00000638076 DHX58Q96C10 678 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 IMPACTQ9P2X3 320 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 GAKO14976 1311 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 RIMBP2O15034 1052 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 GTF2IP78347 998 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 ATP2C1P98194 919 aaPredicted RBP24.56■■□□□ 1.52
CLN6-224ENST00000638076 EYA3Q99504 573 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 OSBPL5Q9H0X9 879 aaPredicted RBP24.56■■□□□ 1.52
CLN6-224ENST00000638076 CDK5RAP2Q96SN8 1893 aa24.56■■□□□ 1.52
CLN6-224ENST00000638076 CALML3P27482 149 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 TRAPPC10P48553 1259 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 GSDMDP57764 484 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 SH3GLB2Q9NR46 395 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 FAM205AQ6ZU69 1335 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 SKILP12757 684 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 ZNF827Q17R98 1081 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 TMC6Q7Z403 805 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 BLIDQ8IZY5 108 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 ATP6V0A2Q9Y487 856 aa24.55■■□□□ 1.52
CLN6-224ENST00000638076 VWA3AA6NCI4 1184 aa24.54■■□□□ 1.52
CLN6-224ENST00000638076 MYRIPQ8NFW9 859 aa24.54■■□□□ 1.52
CLN6-224ENST00000638076 LTBP1Q14766 1721 aa24.54■■□□□ 1.52
CLN6-224ENST00000638076 SNED1Q8TER0 1413 aa24.54■■□□□ 1.52
CLN6-224ENST00000638076 CCZ1BP86790 482 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 CCZ1P86791 482 aaPredicted RBP24.53■■□□□ 1.52
CLN6-224ENST00000638076 MORC3Q14149 939 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 SLC35G1Q2M3R5 365 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 LRRC37AA6NMS7 1700 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 CYTH3O43739 400 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 MCM7P33993 719 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 FANCLQ9NW38 375 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 PCDHA4Q9UN74 947 aa24.53■■□□□ 1.52
CLN6-224ENST00000638076 TYW1BQ6NUM6 668 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 TRIML1Q8N9V2 468 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 CCDC34Q96HJ3 373 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 DAGLAQ9Y4D2 1042 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 PALM3A6NDB9 673 aaPredicted RBP24.52■■□□□ 1.52
CLN6-224ENST00000638076 SERPINC1P01008 464 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 SLFN14P0C7P3 912 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 HMGB2P26583 209 aaKnown RBP24.52■■□□□ 1.52
CLN6-224ENST00000638076 DDX60LQ5H9U9 1706 aaKnown RBP24.52■■□□□ 1.52
CLN6-224ENST00000638076 MLKLQ8NB16 471 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 NEDD1Q8NHV4 660 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 SPATA20Q8TB22 786 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 COA1Q9GZY4 146 aa24.52■■□□□ 1.52
CLN6-224ENST00000638076 GOLGA8HP0CJ92 632 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 SRGNP10124 158 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 UBASH3AP57075 661 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 COL23A1Q86Y22 540 aaPredicted RBP24.51■■□□□ 1.51
CLN6-224ENST00000638076 NLGN1Q8N2Q7 840 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms