RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PTPN14Q15678 1187 aa21.57■■□□□ 1.04
CLN5-216ENST00000636780 TTC38Q5R3I4 469 aa21.57■■□□□ 1.04
CLN5-216ENST00000636780 RPGRQ92834 1020 aaKnown RBP21.57■■□□□ 1.04
CLN5-216ENST00000636780 TNFRSF25Q93038 417 aa21.57■■□□□ 1.04
CLN5-216ENST00000636780 BTAF1O14981 1849 aa21.56■■□□□ 1.04
CLN5-216ENST00000636780 SCG2P13521 617 aa21.56■■□□□ 1.04
CLN5-216ENST00000636780 CDK11BP21127 795 aaKnown RBP21.56■■□□□ 1.04
CLN5-216ENST00000636780 KAT14Q9H8E8 782 aa21.56■■□□□ 1.04
CLN5-216ENST00000636780 MKRN1Q9UHC7 482 aaKnown RBP21.56■■□□□ 1.04
CLN5-216ENST00000636780 CYTH3O43739 400 aa21.56■■□□□ 1.04
CLN5-216ENST00000636780 XBP1P17861 261 aa21.56■■□□□ 1.04
CLN5-216ENST00000636780 TRIM37O94972 964 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 EIF6P56537 245 aaKnown RBP21.55■■□□□ 1.04
CLN5-216ENST00000636780 HOMER1Q86YM7 354 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 LRRN4CLQ8ND94 238 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 OSBPL5Q9H0X9 879 aaPredicted RBP21.55■■□□□ 1.04
CLN5-216ENST00000636780 POLLQ9UGP5 575 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 A0A1B0GUL6 1792 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 IKBKBO14920 756 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 SEMA3EO15041 775 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 ORC4O43929 436 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 TSPY3P0CV98 308 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 TSPY8P0CW00 308 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 GYS1P13807 737 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 TPM4P67936 248 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 DPYDQ12882 1025 aa21.55■■□□□ 1.04
CLN5-216ENST00000636780 C6orf229H3BNL8 230 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 SERPINB2P05120 415 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 BTDP43251 543 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 EEF2KMTQ96G04 330 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 PAGE5Q96GU1 130 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 ARPP21Q9UBL0 812 aaPredicted RBP21.54■■□□□ 1.04
CLN5-216ENST00000636780 SCN7AQ01118 1682 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 SPDYE4A6NLX3 237 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 CD209Q9NNX6 404 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 MYH6P13533 1939 aa21.54■■□□□ 1.04
CLN5-216ENST00000636780 TEX33O43247 280 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 SARSP49591 514 aaKnown RBP21.53■■□□□ 1.04
CLN5-216ENST00000636780 PICALMQ13492 652 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 HEATR3Q7Z4Q2 680 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 CPLX3Q8WVH0 158 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 MTRQ99707 1265 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 RBM28Q9NW13 759 aaKnown RBP21.53■■□□□ 1.04
CLN5-216ENST00000636780 AFF2P51816 1311 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 GTF2F1P35269 517 aaKnown RBP eCLIP21.53■■□□□ 1.04
CLN5-216ENST00000636780 MORC3Q14149 939 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 SYT10Q6XYQ8 523 aa21.53■■□□□ 1.04
CLN5-216ENST00000636780 DDAH1O94760 285 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 NYAP1Q6ZVC0 841 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 PPP1R13BQ96KQ4 1090 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 DDR1Q08345 913 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 CCDC112Q8NEF3 446 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 UIMC1Q96RL1 719 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 MTA3Q9BTC8 594 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 MAD2L2Q9UI95 211 aa21.52■■□□□ 1.04
CLN5-216ENST00000636780 PFKFB3Q16875 520 aaPredicted RBP21.52■■□□□ 1.03
CLN5-216ENST00000636780 MFSD14BQ5SR56 506 aa21.52■■□□□ 1.03
CLN5-216ENST00000636780 ZNF444Q8N0Y2 327 aaPredicted RBP21.52■■□□□ 1.03
CLN5-216ENST00000636780 TMEM47Q9BQJ4 181 aa21.52■■□□□ 1.03
CLN5-216ENST00000636780 UBA5Q9GZZ9 404 aa21.52■■□□□ 1.03
CLN5-216ENST00000636780 XDHP47989 1333 aa21.52■■□□□ 1.03
CLN5-216ENST00000636780 TOP1P11387 765 aaKnown RBP21.51■■□□□ 1.03
CLN5-216ENST00000636780 NCBP1Q09161 790 aaKnown RBP21.51■■□□□ 1.03
CLN5-216ENST00000636780 CUL4BQ13620 913 aa21.51■■□□□ 1.03
CLN5-216ENST00000636780 INF2Q27J81 1249 aa21.51■■□□□ 1.03
CLN5-216ENST00000636780 RTFDC1Q9BY42 306 aaPredicted RBP21.51■■□□□ 1.03
CLN5-216ENST00000636780 TMEM60Q9H2L4 133 aa21.51■■□□□ 1.03
CLN5-216ENST00000636780 CEP131Q9UPN4 1083 aa21.51■■□□□ 1.03
CLN5-216ENST00000636780 KARSQ15046 597 aaKnown RBP21.51■■□□□ 1.03
CLN5-216ENST00000636780 ZNF215Q9UL58 517 aaPredicted RBP21.51■■□□□ 1.03
CLN5-216ENST00000636780 CALM1P0DP23 149 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 CALM2P0DP24 149 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 CALM3P0DP25 149 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 RASA1P20936 1047 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 GTF2IP78347 998 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 SBK1Q52WX2 424 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 PPP4R3BQ5MIZ7 849 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 WWC2Q6AWC2 1192 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 WDR66Q8TBY9 1149 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 PRDM10Q9NQV6 1147 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 A0A0U1RQJ8 604 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 FANCGO15287 622 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 GSDMDP57764 484 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 TEX11Q8IYF3 940 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 ATRIPQ8WXE1 791 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 BRMS1Q9HCU9 246 aa21.5■■□□□ 1.03
CLN5-216ENST00000636780 RCAN1P53805 252 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 ZNF804AQ7Z570 1209 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 VSTM4Q8IW00 320 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 HSPA1LP34931 641 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 MTF1Q14872 753 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 DOK7Q18PE1 504 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 SPTY2D1Q68D10 685 aaPredicted RBP21.49■■□□□ 1.03
CLN5-216ENST00000636780 ZNF579Q8NAF0 562 aaKnown RBP21.49■■□□□ 1.03
CLN5-216ENST00000636780 DESI2Q9BSY9 194 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 IMPACTQ9P2X3 320 aa21.49■■□□□ 1.03
CLN5-216ENST00000636780 SLFN14P0C7P3 912 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 SCNN1DP51172 638 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 CBX1P83916 185 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms