RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 VCAM1P19320 739 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PTPREP23469 700 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 HOXA7P31268 230 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADD2P35612 726 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAGEA10P43363 369 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP5P45974 858 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 CDK8P49336 464 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATN1P54259 1190 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRMT2P55345 433 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SNAP25P60880 206 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ERVK-9P63128 1117 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ERVK-24P63145 666 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 GSTO1P78417 241 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 MDM2Q00987 491 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMEM132BQ14DG7 1078 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 RAB3GAP1Q15042 981 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ABCB5Q2M3G0 1257 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC158Q5M9N0 1113 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 C9orf50Q5SZB4 431 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 GJC2Q5T442 439 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC9C2Q5TAH2 1124 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 CTR9Q6PD62 1173 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC129Q6ZRS4 1044 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 FASTKD5Q7L8L6 764 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPR142Q7Z601 462 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 NBPF11Q86T75 865 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 FOXP4Q8IVH2 680 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SPICE1Q8N0Z3 855 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 CRACR2BQ8N4Y2 399 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZGPATQ8N5A5 531 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLAIN1Q8ND83 568 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 REPS2Q8NFH8 660 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PXYLP1Q8TE99 480 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SMCR8Q8TEV9 937 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 OSBP2Q969R2 916 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 FERMT2Q96AC1 680 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 HOOK2Q96ED9 719 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF512BQ96KM6 892 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 FGD4Q96M96 766 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM161BQ96MY7 647 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PURBQ96QR8 312 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 MOV10L1Q9BXT6 1211 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 RPAP3Q9H6T3 665 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 EPB41L4AQ9HCS5 686 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 DCP1AQ9NPI6 582 aaPredicted RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PI4KBQ9UBF8 816 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 HERC5Q9UII4 1024 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 OGDHLQ9ULD0 1010 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC45A1Q9Y2W3 748 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 RIPK3Q9Y572 518 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PCDHB15Q9Y5E8 787 aa1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 PDCD11Q14690 1871 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 SPTBN5Q9NRC6 3674 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF638Q14966 1978 aaKnown RBP1.96□□□□□ -2.1
SYNGAP1-216ENST00000636640 DENND4CQ5VZ89 1909 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ASTN1O14525 1302 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZBED9Q6R2W3 1325 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 RPTORQ8N122 1335 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SALL3Q9BXA9 1300 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 RALGAPA1Q6GYQ0 2036 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 NOTCH4Q99466 2003 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 IGKV6D-41A0A0C4DH26 115 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRIM43BA6NCK2 446 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GSG1L2A8MUP6 293 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GRXCR1A8MXD5 290 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L15C9J2P7 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 C19orf81C9J6K1 198 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L13C9JLJ4 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L11C9JVI0 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L18D6R9N7 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L22D6RA61 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L17D6RBQ6 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L19D6RCP7 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L20D6RJB6 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 MPHOSPH10O00566 681 aaKnown RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CTAGE5O15320 804 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 EVI5O60447 810 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 NMT2O60551 498 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRDM1O75626 825 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SNAI1O95863 264 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 PGK1P00558 417 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GNRH1P01148 92 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 HMGCRP04035 888 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 POLR3DP05423 398 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ASNSP08243 561 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CYBAP13498 195 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATP5JP18859 108 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ERCC3P19447 782 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 RASA1P20936 1047 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 HOXD10P28358 340 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADORA2AP29274 412 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CNGA1P29973 690 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 DSG3P32926 999 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADCYAP1R1P41586 468 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GCLCP48506 637 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC4A3P48751 1232 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 RTP1P59025 263 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 UBXN2AP68543 259 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 IRX3P78415 501 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CTDSPL2Q05D32 466 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms