RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 RNPC3Q96LT9 517 aaKnown RBP8.95□□□□□ -0.98
CIITA-214ENST00000636238 NEUROD6Q96NK8 337 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 DCTPP1Q9H773 170 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 CABP5Q9NP86 173 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 SERPINB13Q9UIV8 391 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 LAMA2P24043 3122 aaKnown RBP8.94□□□□□ -0.98
CIITA-214ENST00000636238 MAST2Q6P0Q8 1798 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 PLXNB2O15031 1838 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
CIITA-214ENST00000636238 GH2P01242 217 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 CLTBP09497 229 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 PDE4AP27815 886 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 CYP2C19P33261 490 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 COPB2P35606 906 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 PLA2G5P39877 138 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 MCAMP43121 646 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 JAG1P78504 1218 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 NUCB1Q02818 461 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 FPGSQ05932 587 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 COG2Q14746 738 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 LRRC41Q15345 812 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 TRIM60Q495X7 471 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 CCDC158Q5M9N0 1113 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 WDR78Q5VTH9 848 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 ANKRD33Q7Z3H0 272 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 RNF180Q86T96 592 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 MAPKAPK5Q8IW41 473 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 TRPV1Q8NER1 839 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 TGFBRAP1Q8WUH2 860 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 TSEN34Q9BSV6 310 aaKnown RBP8.94□□□□□ -0.98
CIITA-214ENST00000636238 LNPKQ9C0E8 428 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 PRDM5Q9NQX1 630 aaPredicted RBP8.94□□□□□ -0.98
CIITA-214ENST00000636238 AATFQ9NY61 560 aaKnown RBP eCLIP8.94□□□□□ -0.98
CIITA-214ENST00000636238 DIS3Q9Y2L1 958 aaKnown RBP8.94□□□□□ -0.98
CIITA-214ENST00000636238 BDP1A6H8Y1 2624 aa8.94□□□□□ -0.98
CIITA-214ENST00000636238 AK9Q5TCS8 1911 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 MYH13Q9UKX3 1938 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 MUC3AQ02505 3323 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 TRIM43BA6NCK2 446 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 SMARCA5O60264 1052 aaPredicted RBP8.93□□□□□ -0.98
CIITA-214ENST00000636238 HMMRO75330 724 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 GDF11O95390 407 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 SLC25A27O95847 323 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 RARBP10826 455 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 DNAJB2P25686 324 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 ADORA2AP29274 412 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 ADCYAP1R1P41586 468 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 TLE2Q04725 743 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 G3BP1Q13283 466 aaKnown RBP eCLIP8.93□□□□□ -0.98
CIITA-214ENST00000636238 ABCB5Q2M3G0 1257 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 GJC2Q5T442 439 aaPredicted RBP8.93□□□□□ -0.98
CIITA-214ENST00000636238 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 MSL3Q8N5Y2 521 aaKnown RBP8.93□□□□□ -0.98
CIITA-214ENST00000636238 NPLOC4Q8TAT6 608 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 TRIM43Q96BQ3 446 aaPredicted RBP8.93□□□□□ -0.98
CIITA-214ENST00000636238 GAS2L1Q99501 681 aaPredicted RBP8.93□□□□□ -0.98
CIITA-214ENST00000636238 SPATC1LQ9H0A9 340 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 EXOC6BQ9Y2D4 811 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 MROH7Q68CQ1 1323 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 MYH2Q9UKX2 1941 aa8.93□□□□□ -0.98
CIITA-214ENST00000636238 DOCK3Q8IZD9 2030 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 ZNF236Q9UL36 1845 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 DCDC2CA8MYV0 355 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 RAG1P15918 1043 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 MRPS5P82675 430 aaKnown RBP8.92□□□□□ -0.98
CIITA-214ENST00000636238 CERKLQ49MI3 558 aaPredicted RBP8.92□□□□□ -0.98
CIITA-214ENST00000636238 PI16Q6UXB8 463 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 CHD1LQ86WJ1 897 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 NUP133Q8WUM0 1156 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 TIFAQ96CG3 184 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 ASB2Q96Q27 587 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 C1QTNF1Q9BXJ1 281 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 MOV10L1Q9BXT6 1211 aaKnown RBP8.92□□□□□ -0.98
CIITA-214ENST00000636238 SEZ6LQ9BYH1 1024 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 ZNF576Q9H609 170 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 RPAP3Q9H6T3 665 aaPredicted RBP8.92□□□□□ -0.98
CIITA-214ENST00000636238 SH2D4AQ9H788 454 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 THEGQ9P2T0 379 aa8.92□□□□□ -0.98
CIITA-214ENST00000636238 PEX10O60683 326 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 FCER1AP12319 257 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 ERCC3P19447 782 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 PPIGQ13427 754 aaKnown RBP eCLIP8.91□□□□□ -0.98
CIITA-214ENST00000636238 POLA2Q14181 598 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 GRIN2CQ14957 1233 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 RAB30Q15771 203 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 TTC39AQ5SRH9 613 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 RASIP1Q5U651 963 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 FAM122AQ96E09 287 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 MAML3Q96JK9 1138 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
CIITA-214ENST00000636238 MTIF3Q9H2K0 278 aaKnown RBP8.91□□□□□ -0.98
CIITA-214ENST00000636238 XPNPEP3Q9NQH7 507 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
CIITA-214ENST00000636238 PIEZO1Q92508 2521 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms