RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 TMEM102Q8N9M5 508 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 TEX19Q8NA77 164 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 ELAC2Q9BQ52 826 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 CBX8Q9HC52 389 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 TNPO3Q9Y5L0 923 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 PRR36Q9H6K5 1346 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 ANO9A1A5B4 782 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 FAM86C2PA6NEL3 165 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 CT47B1P0C2W7 299 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 U2AF1L5P0DN76 240 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 NME1P15531 152 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 U2AF1Q01081 240 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 SLC7A5Q01650 507 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 HYAL2Q12891 473 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 COBLL1Q53SF7 1204 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 TRIM61Q5EBN2 209 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 CPXCR1Q8N123 301 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 VPS37AQ8NEZ2 397 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 SLC7A14Q8TBB6 771 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 KCTD12Q96CX2 325 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 HS3ST6Q96QI5 342 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 AARSD1Q9BTE6 412 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 NGRNQ9NPE2 291 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 ZNF69Q9UC07 566 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 GJA3Q9Y6H8 435 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 CDK8P49336 464 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 POU4F2Q12837 409 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 CCINQ13939 588 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 SIM2Q14190 667 aaPredicted RBP9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 HSP90AA2PQ14568 343 aaPredicted RBP9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 MINDY4Q4G0A6 757 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 USP7Q93009 1102 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 ATG4CQ96DT6 458 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 SLC9A7Q96T83 725 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 INSM2Q96T92 566 aaPredicted RBP9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 MUC3BQ9H195 1237 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 TIAM1Q13009 1591 aa9.25□□□□□ -0.93
SMARCA2-243ENST00000635590 APBA3O96018 575 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 LDHCP07864 332 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 MSX1P28360 303 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 HALP42357 657 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 SUMO1P63165 101 aaKnown RBP9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 ABCB5Q2M3G0 1257 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 GNPTABQ3T906 1256 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 CCDC70Q6NSX1 233 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 MPRIPQ6WCQ1 1025 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 BRAPQ7Z569 592 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 IFT22Q9H7X7 185 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 CFAP43Q8NDM7 1665 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 SLC26A4O43511 780 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 ST18O60284 1047 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 PIP5K1CO60331 668 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 PHKG2P15735 406 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 SOX18P35713 384 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 PPP2R2AP63151 447 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 GRM3Q14832 879 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 SAFBQ15424 915 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 ALFQ53S48 1182 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 TOGARAM2Q6ZUX3 1019 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 NLRC3Q7RTR2 1065 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 FGD2Q7Z6J4 655 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 PNMA5Q96PV4 448 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 CRTAC1Q9NQ79 661 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 GMIPQ9P107 970 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 FAM50BQ9Y247 325 aa9.24□□□□□ -0.93
SMARCA2-243ENST00000635590 KLRG2A4D1S0 409 aaPredicted RBP9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 WNT7AO00755 349 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 PSAPP07602 524 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 BPIP17213 487 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 ARNTP27540 789 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 PPM1FP49593 454 aaPredicted RBP9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 ZNF252P-AS1Q0IIN9 211 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 GBX1Q14549 363 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 PLCB1Q9NQ66 1216 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 ZBTB21Q9ULJ3 1066 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 CORINQ9Y5Q5 1042 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 ARAP3Q8WWN8 1544 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 PTPRMP28827 1452 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 KIAA0556O60303 1618 aa9.23□□□□□ -0.93
SMARCA2-243ENST00000635590 PDE2AO00408 941 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 TNFRSF10CO14798 259 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 OPA1O60313 960 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 ALDH1A1P00352 501 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 SRGNP10124 158 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 KCNQ4P56696 695 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 ZNF280AP59817 542 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 ADAMTSL4Q6UY14 1074 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 NEUROD6Q96NK8 337 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 HERPUD2Q9BSE4 406 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 CLEC4MQ9H2X3 399 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 SLC52A2Q9HAB3 445 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 TCF7L1Q9HCS4 588 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 NDOR1Q9UHB4 597 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 ZNF214Q9UL59 606 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 KCNH4Q9UQ05 1017 aa9.22□□□□□ -0.93
SMARCA2-243ENST00000635590 SLC22A31A6NKX4 558 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 DNAJA2O60884 412 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms