RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 NUF2Q9BZD4 464 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 FLOT1O75955 427 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 ALAS1P13196 640 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 TAB2Q9NYJ8 693 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 I3L4J1 428 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
SHPRH-211ENST00000629427 HHATQ5VTY9 493 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 NCAPG2Q86XI2 1143 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 STAMQ92783 540 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 RBSNQ9H1K0 784 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 OTUD7BQ6GQQ9 843 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 ATP2A3Q93084 1043 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 NOC2LQ9Y3T9 749 aaKnown RBP12.99□□□□□ -0.33
SHPRH-211ENST00000629427 KDM3AQ9Y4C1 1321 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHPRH-211ENST00000629427 C8orf34Q49A92 452 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 SND1Q7KZF4 910 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHPRH-211ENST00000629427 RSPH3Q86UC2 560 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 LIG4P49917 911 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 NLRP12P59046 1061 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 AFAP1L1Q8TED9 768 aa12.99□□□□□ -0.33
SHPRH-211ENST00000629427 ZBTB7BO15156 539 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-211ENST00000629427 SCNN1DP51172 638 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 SESTD1Q86VW0 696 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 RILPQ96NA2 401 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 KRT15P19012 456 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 TECP42680 631 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 RPS6KA2Q15349 733 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
SHPRH-211ENST00000629427 KCNG1Q9UIX4 513 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 ANKRD35Q8N283 1001 aa12.98□□□□□ -0.33
SHPRH-211ENST00000629427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.98□□□□□ -0.33
SHPRH-211ENST00000629427 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-211ENST00000629427 PRR16Q569H4 304 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 TYW1BQ6NUM6 668 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 SMC5Q8IY18 1101 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 MUM1L1Q5H9M0 696 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 ZBTB8OSQ8IWT0 167 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 NT5C3AQ9H0P0 336 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-211ENST00000629427 GBP1P32455 592 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 SF3A3Q12874 501 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHPRH-211ENST00000629427 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 DENND2CQ68D51 928 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 MCUR1Q96AQ8 359 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 LSM14BQ9BX40 385 aaKnown RBP12.97□□□□□ -0.33
SHPRH-211ENST00000629427 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 GNA14O95837 355 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 SEPT6Q14141 434 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 VCX3BQ9H321 246 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 TNNC2P02585 160 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 IGBP1P78318 339 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 PPARAQ07869 468 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 KIAA0825Q8IV33 1275 aa12.97□□□□□ -0.33
SHPRH-211ENST00000629427 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
SHPRH-211ENST00000629427 MAGEA1P43355 309 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 KIF11P52732 1056 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 C2CD5Q86YS7 1000 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 CACNA2D3Q8IZS8 1091 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 ZNF277Q9NRM2 450 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-211ENST00000629427 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.33
SHPRH-211ENST00000629427 PABPC4Q13310 644 aaKnown RBP eCLIP12.96□□□□□ -0.33
SHPRH-211ENST00000629427 DCAF15Q66K64 600 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 PALM2Q8IXS6 379 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 KRT12Q99456 494 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 FAM207AQ9NSI2 230 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-211ENST00000629427 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.33
SHPRH-211ENST00000629427 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 XKR9Q5GH70 373 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 OTUD7AQ8TE49 926 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-211ENST00000629427 IWS1Q96ST2 819 aa12.96□□□□□ -0.33
SHPRH-211ENST00000629427 USP19O94966 1318 aa12.96□□□□□ -0.34
SHPRH-211ENST00000629427 E7EWF7 191 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms