RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
CCDC163-201ENST00000625766 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 A0A1W2PQ27 194 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 A0A1W2PQ64 194 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 A0A1W2PQD8 194 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 TTLL1O95922 423 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 SCG2P13521 617 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 TCP10Q12799 353 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
CCDC163-201ENST00000625766 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 SPZ1Q9BXG8 430 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC163-201ENST00000625766 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
CCDC163-201ENST00000625766 SPTLC2O15270 562 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 RILPL1Q5EBL4 403 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
CCDC163-201ENST00000625766 PCDHA7Q9UN72 937 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 BCS1LQ9Y276 419 aa13.54□□□□□ -0.24
CCDC163-201ENST00000625766 ECM29Q5VYK3 1845 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 SYCE3A1L190 88 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 KLRF2D3W0D1 207 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 PPP6R2O75170 966 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 XRCC6P12956 609 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 LIG1P18858 919 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 RPS12P25398 132 aaKnown RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 STK38Q15208 465 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 TMOD2Q9NZR1 351 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 VPS54Q9P1Q0 977 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 GOLGB1Q14789 3259 aaKnown RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
CCDC163-201ENST00000625766 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
CCDC163-201ENST00000625766 CYTH3O43739 400 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 PTPAQ15257 358 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 NPY5RQ15761 445 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.24
CCDC163-201ENST00000625766 KANSL2Q9H9L4 492 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 NYAP2Q9P242 653 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.24
CCDC163-201ENST00000625766 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.24
CCDC163-201ENST00000625766 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
CCDC163-201ENST00000625766 FZD9O00144 591 aa13.52□□□□□ -0.25
CCDC163-201ENST00000625766 KRT2P35908 639 aa13.52□□□□□ -0.25
CCDC163-201ENST00000625766 ME1P48163 572 aa13.52□□□□□ -0.25
CCDC163-201ENST00000625766 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.25
CCDC163-201ENST00000625766 ZNF280AP59817 542 aaPredicted RBP13.52□□□□□ -0.25
CCDC163-201ENST00000625766 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
CCDC163-201ENST00000625766 FAM83AQ86UY5 434 aa13.52□□□□□ -0.25
CCDC163-201ENST00000625766 RIOX1Q9H6W3 641 aa13.52□□□□□ -0.25
CCDC163-201ENST00000625766 ADAMTSL1Q8N6G6 1762 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 PDHBP11177 359 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
CCDC163-201ENST00000625766 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
CCDC163-201ENST00000625766 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
CCDC163-201ENST00000625766 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 DPF2Q92785 391 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 BRMS1Q9HCU9 246 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 USP17L5A8MUK1 530 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 TBC1D12O60347 775 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 CALML3P27482 149 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 MAP3K10Q02779 954 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 NR5A1Q13285 461 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 SNW1Q13573 536 aaKnown RBP13.51□□□□□ -0.25
CCDC163-201ENST00000625766 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 RBM43Q6ZSC3 357 aaKnown RBP13.51□□□□□ -0.25
CCDC163-201ENST00000625766 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
CCDC163-201ENST00000625766 MYH15Q9Y2K3 1946 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 NR1I2O75469 434 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 CMA1P23946 247 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 SYNPO2Q9UMS6 1093 aa13.5□□□□□ -0.25
CCDC163-201ENST00000625766 WNT10BO00744 389 aa13.49□□□□□ -0.25
CCDC163-201ENST00000625766 MYO1BO43795 1136 aa13.49□□□□□ -0.25
CCDC163-201ENST00000625766 GOLGA8HP0CJ92 632 aa13.49□□□□□ -0.25
CCDC163-201ENST00000625766 NLRP5P59047 1200 aa13.49□□□□□ -0.25
CCDC163-201ENST00000625766 SIAH1Q8IUQ4 282 aa13.49□□□□□ -0.25
CCDC163-201ENST00000625766 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
CCDC163-201ENST00000625766 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms