RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 C7orf61Q8IZ16 206 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 SPICE1Q8N0Z3 855 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
USH1C-211ENST00000624811 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 COL11A1P12107 1806 aaPredicted RBP16.53■□□□□ 0.24
USH1C-211ENST00000624811 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
USH1C-211ENST00000624811 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.24
USH1C-211ENST00000624811 CDK8P49336 464 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 MNX1P50219 401 aaPredicted RBP16.52■□□□□ 0.24
USH1C-211ENST00000624811 ICA1Q05084 483 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 AMOTL1Q8IY63 956 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 TRMT44Q8IYL2 757 aaKnown RBP16.52■□□□□ 0.24
USH1C-211ENST00000624811 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 C11orf49Q9H6J7 331 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 FLRT1Q9NZU1 646 aa16.52■□□□□ 0.24
USH1C-211ENST00000624811 CAPN2P17655 700 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 PTPREP23469 700 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 NBPF3Q9H094 633 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 ARHGEF10LQ9HCE6 1279 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
USH1C-211ENST00000624811 SLC15A5A6NIM6 579 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 RAD21O60216 631 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 COG2Q14746 738 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 NPLOC4Q8TAT6 608 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 DCTPP1Q9H773 170 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
USH1C-211ENST00000624811 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
USH1C-211ENST00000624811 ZNFX1Q9P2E3 1918 aaKnown RBP16.5■□□□□ 0.23
USH1C-211ENST00000624811 FLOT1O75955 427 aa16.49■□□□□ 0.23
USH1C-211ENST00000624811 CNGA1P29973 690 aa16.49■□□□□ 0.23
USH1C-211ENST00000624811 PLS1Q14651 629 aa16.49■□□□□ 0.23
USH1C-211ENST00000624811 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
USH1C-211ENST00000624811 MOV10L1Q9BXT6 1211 aaKnown RBP16.49■□□□□ 0.23
USH1C-211ENST00000624811 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
USH1C-211ENST00000624811 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
USH1C-211ENST00000624811 SYN1P17600 705 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 GRB14Q14449 540 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 MFSD14CQ5VZR4 134 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 LHX8Q68G74 356 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 ATG4CQ96DT6 458 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
USH1C-211ENST00000624811 SPATC1LQ9H0A9 340 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 PRO3102Q9H379 93 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
USH1C-211ENST00000624811 PFASO15067 1338 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
USH1C-211ENST00000624811 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 RANBP2P49792 3224 aaKnown RBP16.47■□□□□ 0.23
USH1C-211ENST00000624811 MINDY4BA8MYZ0 360 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 ERCC3P19447 782 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 DSG3P32926 999 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 CYP2C19P33261 490 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 DPP9Q86TI2 863 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 LPAR1Q92633 364 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 CCDC17Q96LX7 622 aa16.47■□□□□ 0.23
USH1C-211ENST00000624811 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
USH1C-211ENST00000624811 RNF113AO15541 343 aaKnown RBP16.46■□□□□ 0.23
USH1C-211ENST00000624811 ADORA2AP29274 412 aa16.46■□□□□ 0.23
USH1C-211ENST00000624811 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
USH1C-211ENST00000624811 OSBP2Q969R2 916 aa16.46■□□□□ 0.23
USH1C-211ENST00000624811 PCDHB15Q9Y5E8 787 aa16.46■□□□□ 0.23
USH1C-211ENST00000624811 PLXNA1Q9UIW2 1896 aa16.46■□□□□ 0.22
USH1C-211ENST00000624811 GSG1L2A8MUP6 293 aa16.45■□□□□ 0.22
USH1C-211ENST00000624811 M0R2C6 588 aa16.45■□□□□ 0.22
USH1C-211ENST00000624811 WDR46O15213 610 aaKnown RBP16.45■□□□□ 0.22
USH1C-211ENST00000624811 TRPV1Q8NER1 839 aa16.45■□□□□ 0.22
USH1C-211ENST00000624811 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
USH1C-211ENST00000624811 APPBP2Q92624 585 aa16.45■□□□□ 0.22
USH1C-211ENST00000624811 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
USH1C-211ENST00000624811 FBXO28Q9NVF7 368 aa16.45■□□□□ 0.22
USH1C-211ENST00000624811 GPAA1O43292 621 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 COBLO75128 1261 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 APPP05067 770 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 HOXC6P09630 235 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 FAM83BQ5T0W9 1011 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 MB21D1Q8N884 522 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 SHCBP1Q8NEM2 672 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
USH1C-211ENST00000624811 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
USH1C-211ENST00000624811 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
USH1C-211ENST00000624811 STRNO43815 780 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 COL6A1P12109 1028 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 RASA1P20936 1047 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 TDO2P48775 406 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms