RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 DCLK2Q8N568 766 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 TMOD3Q9NYL9 352 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 SLIT3O75094 1523 aa10.34□□□□□ -0.75
USB1-216ENST00000624720 TMEM221A6NGB7 291 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 WASHC5Q12768 1159 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 BTG3Q14201 252 aaPredicted RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 MEX3CQ5U5Q3 659 aaKnown RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 PAPOLBQ9NRJ5 636 aaKnown RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 CCDC159P0C7I6 412 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 EZRP15311 586 aaKnown RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 GBP2P32456 591 aaPredicted RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 INHBCP55103 352 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 DTNBP1Q96EV8 351 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 ACBD3Q9H3P7 528 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 TUBGCP4Q9UGJ1 667 aa10.33□□□□□ -0.76
USB1-216ENST00000624720 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
USB1-216ENST00000624720 PDLIM1O00151 329 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 PARP1P09874 1014 aaKnown RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 NEK2P51955 445 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 SPATS2Q86XZ4 545 aaKnown RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 RILPL2Q969X0 211 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 CENPTQ96BT3 561 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 SENP7Q9BQF6 1050 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 TNMDQ9H2S6 317 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 CROTQ9UKG9 612 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 ATP6V0A2Q9Y487 856 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 JCADQ9P266 1359 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 NDUFB5O43674 189 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 SNRPA1P09661 255 aaKnown RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 CUL3Q13618 768 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 DNAJC10Q8IXB1 793 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 CHCHD4Q8N4Q1 142 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 PIGBQ92521 554 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 DHTKD1Q96HY7 919 aaPredicted RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 IFT122Q9HBG6 1241 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 PCDH11XQ9BZA7 1347 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 PCDH11YQ9BZA8 1340 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 LINC00854A0A1B0GVQ3 168 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 MTA2O94776 668 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 FERP16591 822 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 KIF11P52732 1056 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 ARHGEF6Q15052 776 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 PDIA6Q15084 440 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 BEND3Q5T5X7 828 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 CCSAPQ6IQ19 270 aaPredicted RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 TLDC1Q6P9B6 456 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 UBE3BQ7Z3V4 1068 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 WDR75Q8IWA0 830 aaKnown RBP10.32□□□□□ -0.76
USB1-216ENST00000624720 YIPF3Q9GZM5 350 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 SSX2IPQ9Y2D8 614 aa10.32□□□□□ -0.76
USB1-216ENST00000624720 COL22A1Q8NFW1 1626 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 COL5A2P05997 1499 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 KCNQ2O43526 872 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 ZFXP17010 805 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 CLK1P49759 484 aaKnown RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 LONRF1Q17RB8 773 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 MAP7D1Q3KQU3 841 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 PTF1AQ7RTS3 328 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 SAMD14Q8IZD0 417 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.76
USB1-216ENST00000624720 CFAP45Q9UL16 551 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 PAIP2BQ9ULR5 123 aaKnown RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 HIP1RO75146 1068 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 CASTP20810 708 aaKnown RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 ARPC4P59998 168 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 ITIH3Q06033 890 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 NAA16Q6N069 864 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 SMARCC1Q92922 1105 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 TUBA8Q9NY65 449 aaPredicted RBP10.31□□□□□ -0.76
USB1-216ENST00000624720 DNAI1Q9UI46 699 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 SPATA31A6Q5VVP1 1343 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 ADCY9O60503 1353 aa10.31□□□□□ -0.76
USB1-216ENST00000624720 NBPF26B4DH59 902 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 GNAI3P08754 354 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 ERCC5P28715 1186 aaPredicted RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 CSE1LP55060 971 aaKnown RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 DDB1Q16531 1140 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 ERCC6LQ2NKX8 1250 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 NBPF14Q5TI25 921 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 EMC10Q5UCC4 262 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 KANK3Q6NY19 840 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
USB1-216ENST00000624720 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 ATP6V0A4Q9HBG4 840 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
USB1-216ENST00000624720 FAN1Q9Y2M0 1017 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 VIRMAQ69YN4 1812 aaKnown RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 RRM1P23921 792 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 CCDC152Q4G0S7 254 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 THOC7Q6I9Y2 204 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms