RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 CUL4AQ13619 759 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 UAP1Q16222 522 aaPredicted RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 ASIC2Q16515 512 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 DPCR1Q3MIW9 517 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF274Q96GC6 653 aaPredicted RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 SETDB2Q96T68 719 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 DSCC1Q9BVC3 393 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 COMMD10Q9Y6G5 202 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 NHSL1Q5SYE7 1610 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 CETN3O15182 167 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 RFC4P35249 363 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 EIF4A1P60842 406 aaKnown RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 IRX5P78411 483 aaPredicted RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 ATP11AP98196 1134 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 KLHL30Q0D2K2 578 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 RPS6KA1Q15418 735 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PTPROQ16827 1216 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TTC19Q6DKK2 380 aaPredicted RBP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 DPH6Q7L8W6 267 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 VSIG1Q86XK7 387 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 NELFCDQ8IXH7 590 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 TRIM7Q9C029 511 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 BABAM1Q9NWV8 329 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 SWAP70Q9UH65 585 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 PCDHA5Q9Y5H7 936 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.27□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF532Q9HCE3 1301 aa6.27□□□□□ -1.41
ERCC6-213ENST00000624341 BTBD18B2RXH4 712 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 FERP16591 822 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 SCRN1Q12765 414 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 VWA3BQ502W6 1294 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 HERC4Q5GLZ8 1057 aaPredicted RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 GPCPD1Q9NPB8 672 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 SAP30BPQ9UHR5 308 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 CDK12Q9NYV4 1490 aaPredicted RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 KIF24Q5T7B8 1368 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 IBTKQ9P2D0 1353 aaPredicted RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 HMGB2P26583 209 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 RBM6P78332 1123 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 CEP85LQ5SZL2 805 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 STMN2Q93045 179 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 NAP1L3Q99457 506 aaPredicted RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 LRWD1Q9UFC0 647 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 TRPM1Q7Z4N2 1603 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 PTCH1Q13635 1447 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 ADGRL3Q9HAR2 1447 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 COBLO75128 1261 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 HSPD1P10809 573 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 EPB41P11171 864 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 EIF6P56537 245 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 FAM212AQ96EL1 285 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 FERMT1Q9BQL6 677 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 TACO1Q9BSH4 297 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 IMPG2Q9BZV3 1241 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 KIAA0232Q92628 1395 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 NRXN3Q9Y4C0 1643 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 KCNJ18B7U540 433 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 LDHBP07195 334 aaKnown RBP6.26□□□□□ -1.41
ERCC6-213ENST00000624341 CCT5P48643 541 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 KCNJ12Q14500 433 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 NOSTRINQ8IVI9 506 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 ANKRD13CQ8N6S4 541 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 IL17REQ8NFR9 667 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 GOLGA5Q8TBA6 731 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 RABGGTAQ92696 567 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 MAP4K1Q92918 833 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 CCDC51Q96ER9 411 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 PLEKHF1Q96S99 279 aa6.26□□□□□ -1.41
ERCC6-213ENST00000624341 ENC1O14682 589 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 GIGYF1O75420 1035 aaPredicted RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 LONRF2Q1L5Z9 754 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 PEX26Q7Z412 305 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CCDC84Q86UT8 332 aaPredicted RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SNX29Q8TEQ0 813 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF622Q969S3 477 aaKnown RBP eCLIP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF496Q96IT1 587 aaPredicted RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CAPS2Q9BXY5 557 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 DNAI2Q9GZS0 605 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 PKD2L1Q9P0L9 805 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ASIC3Q9UHC3 531 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FRMD4BQ9Y2L6 1034 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 KNDC1Q76NI1 1749 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 STX10O60499 249 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ZMYND10O75800 440 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 LARGE1O95461 756 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 PDIA3P30101 505 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ARID5BQ14865 1188 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 PUM3Q15397 648 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FBXO18Q8NFZ0 1043 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 MGARPQ8TDB4 240 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 RPGRIP1Q96KN7 1286 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FAM204AQ9H8W3 233 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CTTNBP2NLQ9P2B4 639 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 STAP2Q9UGK3 403 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 BUB1O43683 1085 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CTNNA1P35221 906 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 MRPL12P52815 198 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 KCTD16Q68DU8 428 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms