RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
EPB42-210ENST00000622454 MRFAP1L1Q96HT8 127 aa16.03■□□□□ 0.16
EPB42-210ENST00000622454 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 BMP15O95972 392 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 GNAQP50148 359 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 C16orf86Q6ZW13 317 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 TNFRSF25Q93038 417 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 ZC3H12CQ9C0D7 883 aaKnown RBP16.02■□□□□ 0.16
EPB42-210ENST00000622454 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
EPB42-210ENST00000622454 SUGT1Q9Y2Z0 365 aa16.02■□□□□ 0.16
EPB42-210ENST00000622454 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.15
EPB42-210ENST00000622454 FAM205CA6NFA0 338 aa16.02■□□□□ 0.15
EPB42-210ENST00000622454 GRM4Q14833 912 aa16.02■□□□□ 0.15
EPB42-210ENST00000622454 EARS2Q5JPH6 523 aaKnown RBP16.02■□□□□ 0.15
EPB42-210ENST00000622454 KCNF1Q9H3M0 494 aa16.02■□□□□ 0.15
EPB42-210ENST00000622454 PTGS1P23219 599 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 CDK8P49336 464 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 NLRP5P59047 1200 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 GRIN1Q05586 938 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 PNOCQ13519 176 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
EPB42-210ENST00000622454 STX8Q9UNK0 236 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
EPB42-210ENST00000622454 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
EPB42-210ENST00000622454 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
EPB42-210ENST00000622454 ZNF622Q969S3 477 aaKnown RBP eCLIP16■□□□□ 0.15
EPB42-210ENST00000622454 MASTLQ96GX5 879 aa16■□□□□ 0.15
EPB42-210ENST00000622454 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
EPB42-210ENST00000622454 SH3GLB2Q9NR46 395 aa16■□□□□ 0.15
EPB42-210ENST00000622454 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
EPB42-210ENST00000622454 CALML3P27482 149 aa16■□□□□ 0.15
EPB42-210ENST00000622454 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.15
EPB42-210ENST00000622454 DPP8Q6V1X1 898 aaPredicted RBP16■□□□□ 0.15
EPB42-210ENST00000622454 STAG2Q8N3U4 1231 aa16■□□□□ 0.15
EPB42-210ENST00000622454 EYA3Q99504 573 aa16■□□□□ 0.15
EPB42-210ENST00000622454 MAD2L2Q9UI95 211 aa16■□□□□ 0.15
EPB42-210ENST00000622454 MYH8P13535 1937 aa16■□□□□ 0.15
EPB42-210ENST00000622454 SNED1Q8TER0 1413 aa16■□□□□ 0.15
EPB42-210ENST00000622454 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
EPB42-210ENST00000622454 SMTNL1A8MU46 457 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 POLR2DO15514 142 aaKnown RBP15.99■□□□□ 0.15
EPB42-210ENST00000622454 TPM4P67936 248 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 NEDD1Q8NHV4 660 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 TMEM47Q9BQJ4 181 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 NRBP1Q9UHY1 535 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
EPB42-210ENST00000622454 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 KIAA1524Q8TCG1 905 aa15.99■□□□□ 0.15
EPB42-210ENST00000622454 IKBKBO14920 756 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
EPB42-210ENST00000622454 ISM2Q6H9L7 571 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 KANK3Q6NY19 840 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 PCDHA5Q9Y5H7 936 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 BAG6P46379 1132 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 POSTNQ15063 836 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 NOM1Q5C9Z4 860 aaKnown RBP15.98■□□□□ 0.15
EPB42-210ENST00000622454 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
EPB42-210ENST00000622454 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 SPTLC3Q9NUV7 552 aa15.98■□□□□ 0.15
EPB42-210ENST00000622454 PALM3A6NDB9 673 aaPredicted RBP15.97■□□□□ 0.15
EPB42-210ENST00000622454 H0YIN7 160 aa15.97■□□□□ 0.15
EPB42-210ENST00000622454 ZNF174Q15697 407 aa15.97■□□□□ 0.15
EPB42-210ENST00000622454 PIK3AP1Q6ZUJ8 805 aa15.97■□□□□ 0.15
EPB42-210ENST00000622454 CERS5Q8N5B7 392 aa15.97■□□□□ 0.15
EPB42-210ENST00000622454 SERTAD1Q9UHV2 236 aa15.97■□□□□ 0.15
EPB42-210ENST00000622454 G3V3G9 751 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 WNT7AO00755 349 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 NCAPHQ15003 741 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 USP49Q70CQ1 688 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 PDILTQ8N807 584 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 CCDC34Q96HJ3 373 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 PYCARDQ9ULZ3 195 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 TTF2Q9UNY4 1162 aaKnown RBP15.96■□□□□ 0.15
EPB42-210ENST00000622454 F8W031 263 aaPredicted RBP15.96■□□□□ 0.15
EPB42-210ENST00000622454 FOXN1O15353 648 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 TERF1P54274 439 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 ATP2C1P98194 919 aaPredicted RBP15.96■□□□□ 0.15
EPB42-210ENST00000622454 PTGDRQ13258 359 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 NT5DC1Q5TFE4 455 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 FAM177A1Q8N128 213 aaPredicted RBP15.96■□□□□ 0.15
EPB42-210ENST00000622454 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
EPB42-210ENST00000622454 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 MTMR7Q9Y216 660 aa15.96■□□□□ 0.15
EPB42-210ENST00000622454 KLRF2D3W0D1 207 aa15.95■□□□□ 0.14
EPB42-210ENST00000622454 ACTN4O43707 911 aaKnown RBP15.95■□□□□ 0.14
EPB42-210ENST00000622454 CYTH3O43739 400 aa15.95■□□□□ 0.14
EPB42-210ENST00000622454 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
EPB42-210ENST00000622454 CCDC144BQ3MJ40 725 aa15.95■□□□□ 0.14
EPB42-210ENST00000622454 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
EPB42-210ENST00000622454 C17orf53Q8N3J3 647 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms