RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 GOLGA6L10A6NI86 522 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 SLU7O95391 586 aaKnown RBP10.25□□□□□ -0.77
GGA3-222ENST00000621217 BAG6P46379 1132 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 SLC39A14Q15043 492 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 SPICE1Q8N0Z3 855 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 SH3RF3Q8TEJ3 882 aaPredicted RBP10.25□□□□□ -0.77
GGA3-222ENST00000621217 PLCG2P16885 1265 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 CMA1P23946 247 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 FAM193AP78312 1265 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 USH1GQ495M9 461 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 DYDC1Q8WWB3 177 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 TRIM47Q96LD4 638 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 ZNF215Q9UL58 517 aaPredicted RBP10.25□□□□□ -0.77
GGA3-222ENST00000621217 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
GGA3-222ENST00000621217 GSG1L2A8MUP6 293 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 CUTAO60888 179 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 PARP1P09874 1014 aaKnown RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 IBSPP21815 317 aaPredicted RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 ATP2B4P23634 1241 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 ALDH1B1P30837 517 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 EPS15P42566 896 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 TSGA10IPQ3SY00 556 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 ZNF772Q68DY9 489 aaPredicted RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
GGA3-222ENST00000621217 PUF60Q9UHX1 559 aaKnown RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 WDHD1O75717 1129 aaPredicted RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 PDE6BP35913 854 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 GPSM2P81274 684 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 MAP9Q49MG5 647 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 BARGINQ6ZT62 677 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 KIAA1328Q86T90 577 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 RTL9Q8NET4 1388 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 PLEKHA8P1O95397 391 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 POLD1P28340 1107 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 MTIF2P46199 727 aaKnown RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 TTC38Q5R3I4 469 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 MICALCLQ6ZW33 695 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 EPSTI1Q96J88 318 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
GGA3-222ENST00000621217 DRC1Q96MC2 740 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 CSRNP2Q9H175 543 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 ARFGAP3Q9NP61 516 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 TCP11L1Q9NUJ3 509 aa10.24□□□□□ -0.77
GGA3-222ENST00000621217 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 MYO1BO43795 1136 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 TEKT1Q969V4 418 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 CD209Q9NNX6 404 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 ZNHIT6Q9NWK9 470 aaKnown RBP10.23□□□□□ -0.77
GGA3-222ENST00000621217 RSPH14Q9UHP6 348 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 NFAT5O94916 1531 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 POTEB2H3BUK9 544 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 CLEC10AQ8IUN9 316 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 CPXCR1Q8N123 301 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 BCL9O00512 1426 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 SLC16A2P36021 539 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
GGA3-222ENST00000621217 RAD51AP2Q09MP3 1159 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 USP17L2Q6R6M4 530 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 KRBA2Q6ZNG9 492 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
GGA3-222ENST00000621217 BAG1Q99933 345 aaPredicted RBP10.23□□□□□ -0.77
GGA3-222ENST00000621217 LEMD3Q9Y2U8 911 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 LTN1O94822 1766 aa10.23□□□□□ -0.77
GGA3-222ENST00000621217 KIF5CO60282 957 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 GDF11O95390 407 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 NF2P35240 595 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 SP4Q02446 784 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 FMR1NBQ8N0W7 255 aaPredicted RBP10.22□□□□□ -0.77
GGA3-222ENST00000621217 HDAC9Q9UKV0 1011 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 CALM1P0DP23 149 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 CALM2P0DP24 149 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 CALM3P0DP25 149 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 ASIC1P78348 528 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 TAB2Q9NYJ8 693 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 AKAP12Q02952 1782 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 BBOX1O75936 387 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 SLC1A4P43007 532 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 PTGDRQ13258 359 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 ERCC6LQ2NKX8 1250 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 CARD6Q9BX69 1037 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 LY9Q9HBG7 655 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 BIN2Q9UBW5 565 aaPredicted RBP10.22□□□□□ -0.77
GGA3-222ENST00000621217 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 TMEM232C9JQI7 657 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 CAPN2P17655 700 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 ARID4AP29374 1257 aaPredicted RBP10.22□□□□□ -0.77
GGA3-222ENST00000621217 TXKP42681 527 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 IGSF22Q8N9C0 903 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 PLA2G12BQ9BX93 195 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 HOMER2Q9NSB8 354 aa10.22□□□□□ -0.77
GGA3-222ENST00000621217 SAMSN1Q9NSI8 373 aaKnown RBP10.22□□□□□ -0.77
GGA3-222ENST00000621217 MCM3P25205 808 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms