RNA–Protein interactions for RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 MMP10P09238 476 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 DUOXA2Q1HG44 320 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 Q6ZS46 218 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 SEMA6BQ9H3T3 888 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 NPHS2Q9NP85 383 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
MALAT1-217ENST00000620902 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
MALAT1-217ENST00000620902 NSD2O96028 1365 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 COL6A3P12111 3177 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 ALX3O95076 343 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 DALRD3Q5D0E6 543 aaKnown RBP12.05□□□□□ -0.48
MALAT1-217ENST00000620902 ACAD11Q709F0 780 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 AMIGO3Q86WK7 504 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
MALAT1-217ENST00000620902 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
MALAT1-217ENST00000620902 EHD4Q9H223 541 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 PIM2Q9P1W9 311 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
MALAT1-217ENST00000620902 TREHO43280 583 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 LMNB1P20700 586 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 KCNA3P22001 575 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 GRM1Q13255 1194 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 DSC3Q14574 896 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
MALAT1-217ENST00000620902 MEGF10Q96KG7 1140 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 CAPNS2Q96L46 248 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 SLIT3O75094 1523 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 CACNA1AO00555 2505 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
MALAT1-217ENST00000620902 METTL12A8MUP2 240 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 DDX3YO15523 660 aaKnown RBP12.03□□□□□ -0.48
MALAT1-217ENST00000620902 DYRK3O43781 588 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 ADAM11O75078 769 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 WISP1O95388 367 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 ESRRAP11474 423 aaPredicted RBP12.03□□□□□ -0.48
MALAT1-217ENST00000620902 ECE1P42892 770 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 LDHDQ86WU2 507 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 CEP41Q9BYV8 373 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
MALAT1-217ENST00000620902 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
MALAT1-217ENST00000620902 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
MALAT1-217ENST00000620902 GRIA4P48058 902 aa12.02□□□□□ -0.49
MALAT1-217ENST00000620902 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
MALAT1-217ENST00000620902 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.49not detected■□□□□ 9.5
MALAT1-217ENST00000620902 TRAK1Q9UPV9 953 aa12.02□□□□□ -0.49
MALAT1-217ENST00000620902 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
MALAT1-217ENST00000620902 USP47Q96K76 1375 aa12.02□□□□□ -0.49
MALAT1-217ENST00000620902 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.49
MALAT1-217ENST00000620902 IL2RBP14784 551 aa12.01□□□□□ -0.49
MALAT1-217ENST00000620902 GLB1P16278 677 aa12.01□□□□□ -0.49
MALAT1-217ENST00000620902 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
MALAT1-217ENST00000620902 ASB16Q96NS5 453 aa12.01□□□□□ -0.49
MALAT1-217ENST00000620902 GADD45BO75293 160 aaPredicted RBP12□□□□□ -0.49
MALAT1-217ENST00000620902 NLRP12P59046 1061 aa12□□□□□ -0.49
MALAT1-217ENST00000620902 PTPN12Q05209 780 aaKnown RBP12□□□□□ -0.49
MALAT1-217ENST00000620902 PCDH1Q08174 1060 aa12□□□□□ -0.49
MALAT1-217ENST00000620902 SPRED3Q2MJR0 410 aa12□□□□□ -0.49
MALAT1-217ENST00000620902 CYP4F22Q6NT55 531 aa12□□□□□ -0.49
MALAT1-217ENST00000620902 PRPF40BQ6NWY9 871 aaKnown RBP12□□□□□ -0.49
MALAT1-217ENST00000620902 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
MALAT1-217ENST00000620902 ACEP12821 1306 aa12□□□□□ -0.49
MALAT1-217ENST00000620902 ITPKAP23677 461 aa11.99□□□□□ -0.49
MALAT1-217ENST00000620902 HGSNATQ68CP4 663 aa11.99□□□□□ -0.49
MALAT1-217ENST00000620902 UBASH3BQ8TF42 649 aa11.99□□□□□ -0.49
MALAT1-217ENST00000620902 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
MALAT1-217ENST00000620902 PPP4R2Q9NY27 417 aa11.99□□□□□ -0.49
MALAT1-217ENST00000620902 MAP2K2P36507 400 aa11.98□□□□□ -0.49
MALAT1-217ENST00000620902 ENOX2Q16206 610 aaKnown RBP11.98□□□□□ -0.49
MALAT1-217ENST00000620902 AEBP1Q8IUX7 1158 aa11.98□□□□□ -0.49
MALAT1-217ENST00000620902 EPS8L3Q8TE67 593 aaKnown RBP11.98□□□□□ -0.49
MALAT1-217ENST00000620902 CEP290O15078 2479 aa11.97□□□□□ -0.49
MALAT1-217ENST00000620902 MEGF11A6BM72 1044 aa11.97□□□□□ -0.49
MALAT1-217ENST00000620902 AOC2O75106 756 aa11.97□□□□□ -0.49
MALAT1-217ENST00000620902 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
MALAT1-217ENST00000620902 PNMA6FA0A0J9YX94 578 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 GSTM4Q03013 218 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 ZNF423Q2M1K9 1284 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 UVSSAQ2YD98 709 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 UBL7Q96S82 380 aaPredicted RBP11.96□□□□□ -0.49
MALAT1-217ENST00000620902 RUSC1Q9BVN2 902 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 ZNF576Q9H609 170 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 ZFYVE1Q9HBF4 777 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 ABCB6Q9NP58 842 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 C4AP0C0L4 1744 aa11.96□□□□□ -0.49
MALAT1-217ENST00000620902 TMEM238LA0A1B0GVL6 79 aa11.95□□□□□ -0.5
MALAT1-217ENST00000620902 GRM2Q14416 872 aa11.95□□□□□ -0.5
MALAT1-217ENST00000620902 RPS26P11Q5JNZ5 115 aaPredicted RBP11.95□□□□□ -0.5
MALAT1-217ENST00000620902 ANKRD34AQ69YU3 496 aa11.95□□□□□ -0.5
MALAT1-217ENST00000620902 PRR23CQ6ZRP0 262 aa11.95□□□□□ -0.5
MALAT1-217ENST00000620902 MKI67P46013 3256 aaKnown RBP11.94□□□□□ -0.5
MALAT1-217ENST00000620902 ITGB7P26010 798 aa11.94□□□□□ -0.5
MALAT1-217ENST00000620902 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
MALAT1-217ENST00000620902 FAM50AQ14320 339 aaKnown RBP11.94□□□□□ -0.5
MALAT1-217ENST00000620902 IQCA1LA6NCM1 817 aa11.93□□□□□ -0.5
MALAT1-217ENST00000620902 B3GALT4O96024 378 aa11.93□□□□□ -0.5
MALAT1-217ENST00000620902 CYP11A1P05108 521 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms