RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 LSG1Q9H089 658 aaKnown RBP21.63■■□□□ 1.05
LITAF-220ENST00000620789 CLIP2Q9UDT6 1046 aa21.63■■□□□ 1.05
LITAF-220ENST00000620789 TTLL1O95922 423 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 BCRP11274 1271 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 NT5C2P49902 561 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 KIAA1755Q5JYT7 1200 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 PPP4R3BQ5MIZ7 849 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 MKL1Q969V6 931 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 RPAP3Q9H6T3 665 aaPredicted RBP21.62■■□□□ 1.05
LITAF-220ENST00000620789 GOPCQ9HD26 462 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
LITAF-220ENST00000620789 MYH4Q9Y623 1939 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 CATSPERGQ6ZRH7 1159 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 SPICE1Q8N0Z3 855 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 ESR2Q92731 530 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 ERO1AQ96HE7 468 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 ANO2Q9NQ90 1003 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 SYNPO2Q9UMS6 1093 aa21.61■■□□□ 1.05
LITAF-220ENST00000620789 RBM8AQ9Y5S9 174 aaKnown RBP21.61■■□□□ 1.05
LITAF-220ENST00000620789 NMT2O60551 498 aa21.6■■□□□ 1.05
LITAF-220ENST00000620789 CYP21A2P08686 494 aa21.6■■□□□ 1.05
LITAF-220ENST00000620789 GCLCP48506 637 aaPredicted RBP21.6■■□□□ 1.05
LITAF-220ENST00000620789 HERVK_113P62684 666 aa21.6■■□□□ 1.05
LITAF-220ENST00000620789 CD99L2Q8TCZ2 262 aa21.6■■□□□ 1.05
LITAF-220ENST00000620789 P2RX7Q99572 595 aaKnown RBP21.6■■□□□ 1.05
LITAF-220ENST00000620789 TCP11L1Q9NUJ3 509 aa21.6■■□□□ 1.05
LITAF-220ENST00000620789 WDR46O15213 610 aaKnown RBP21.59■■□□□ 1.05
LITAF-220ENST00000620789 LACTBP83111 547 aaPredicted RBP21.59■■□□□ 1.05
LITAF-220ENST00000620789 CTU1Q7Z7A3 348 aaKnown RBP21.59■■□□□ 1.05
LITAF-220ENST00000620789 NKX2-3Q8TAU0 364 aa21.59■■□□□ 1.05
LITAF-220ENST00000620789 CNNM2Q9H8M5 875 aa21.59■■□□□ 1.05
LITAF-220ENST00000620789 STX8Q9UNK0 236 aa21.59■■□□□ 1.05
LITAF-220ENST00000620789 F5H6K3 240 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 RAD21O60216 631 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 NOVP48745 357 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 KLRC3Q07444 240 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 FAM110CQ1W6H9 321 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 LRRC47Q8N1G4 583 aaKnown RBP21.58■■□□□ 1.05
LITAF-220ENST00000620789 ANKRD13CQ8N6S4 541 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 KRT23Q9C075 422 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 TANGO6Q9C0B7 1094 aa21.58■■□□□ 1.05
LITAF-220ENST00000620789 B4E1Z4 1266 aa21.57■■□□□ 1.04
LITAF-220ENST00000620789 KDM4AO75164 1064 aa21.57■■□□□ 1.04
LITAF-220ENST00000620789 KIF22Q14807 665 aa21.57■■□□□ 1.04
LITAF-220ENST00000620789 GMCL1P1Q8NEA9 526 aa21.57■■□□□ 1.04
LITAF-220ENST00000620789 GTF3C2Q8WUA4 911 aaPredicted RBP21.57■■□□□ 1.04
LITAF-220ENST00000620789 NDUFB10O96000 172 aa21.56■■□□□ 1.04
LITAF-220ENST00000620789 CAP1Q01518 475 aa21.56■■□□□ 1.04
LITAF-220ENST00000620789 LBX2Q6XYB7 198 aa21.56■■□□□ 1.04
LITAF-220ENST00000620789 MORF4L1Q9UBU8 362 aa21.56■■□□□ 1.04
LITAF-220ENST00000620789 TAF6LQ9Y6J9 622 aa21.56■■□□□ 1.04
LITAF-220ENST00000620789 SPDYE16A6NNV3 312 aaPredicted RBP21.55■■□□□ 1.04
LITAF-220ENST00000620789 TRDNQ13061 729 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 COG2Q14746 738 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 ARHGEF6Q15052 776 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 FAM83BQ5T0W9 1011 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 ARHGAP39Q9C0H5 1083 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 EFCC1Q9HA90 598 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 HOXC10Q9NYD6 342 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 RBPJLQ9UBG7 517 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 RLFQ13129 1914 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 ZSWIM8A7E2V4 1837 aa21.55■■□□□ 1.04
LITAF-220ENST00000620789 E7EWF7 191 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 FLOT1O75955 427 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 NECTIN1Q15223 517 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 RCSD1Q6JBY9 416 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 POTEEQ6S8J3 1075 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 OTOP1Q7RTM1 612 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 IQCA1Q86XH1 822 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 TTC14Q96N46 770 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 NUP88Q99567 741 aaPredicted RBP21.54■■□□□ 1.04
LITAF-220ENST00000620789 ZKSCAN3Q9BRR0 538 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 TXNRD2Q9NNW7 524 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 ZSWIM5Q9P217 1185 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 TRIM17Q9Y577 477 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 PARP14Q460N5 1801 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 MYPNQ86TC9 1320 aa21.54■■□□□ 1.04
LITAF-220ENST00000620789 SLC27A2O14975 620 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 TOP1P11387 765 aaKnown RBP21.53■■□□□ 1.04
LITAF-220ENST00000620789 CTGFP29279 349 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 PSMC4P43686 418 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 CCDC178Q5BJE1 867 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 SLFN13Q68D06 897 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 STOX1Q6ZVD7 989 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 TNS4Q8IZW8 715 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 TMEM47Q9BQJ4 181 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 PAGR1Q9BTK6 254 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 MCOLN1Q9GZU1 580 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
LITAF-220ENST00000620789 A0A0G2JMZ2 1700 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 ECM2O94769 699 aaPredicted RBP21.52■■□□□ 1.04
LITAF-220ENST00000620789 GNRH1P01148 92 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 DSG3P32926 999 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 FCGRTP55899 365 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 PKN2Q16513 984 aaKnown RBP21.52■■□□□ 1.04
LITAF-220ENST00000620789 CREB3L3Q68CJ9 461 aa21.52■■□□□ 1.04
LITAF-220ENST00000620789 RALYLQ86SE5 291 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms