RNA–Protein interactions for RNA: ENST00000616959.4

CPEB1-212, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2 BASIC

Gene CPEB1, Length 2,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-212ENST00000616959 CPVLQ9H3G5 476 aa15.13■□□□□ 0.01
CPEB1-212ENST00000616959 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
CPEB1-212ENST00000616959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.13■□□□□ 0.01
CPEB1-212ENST00000616959 RNF181Q9P0P0 153 aa15.13■□□□□ 0.01
CPEB1-212ENST00000616959 KCNJ14Q9UNX9 436 aa15.13■□□□□ 0.01
CPEB1-212ENST00000616959 MYH6P13533 1939 aa15.13■□□□□ 0.01
CPEB1-212ENST00000616959 DICER1Q9UPY3 1922 aaKnown RBP15.13■□□□□ 0.01
CPEB1-212ENST00000616959 TTLL1O95922 423 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 TRIM29Q14134 588 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 PKN1Q16512 942 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 KIF4BQ2VIQ3 1234 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 MIGA2Q7L4E1 593 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
CPEB1-212ENST00000616959 WASF1Q92558 559 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 CCDC17Q96LX7 622 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 FTOQ9C0B1 505 aaKnown RBP eCLIP15.12■□□□□ 0.01
CPEB1-212ENST00000616959 DDX49Q9Y6V7 483 aaKnown RBP15.12■□□□□ 0.01
CPEB1-212ENST00000616959 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 PRPF3O43395 683 aaKnown RBP15.12■□□□□ 0.01
CPEB1-212ENST00000616959 PTMSP20962 102 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 KRT85P78386 507 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 CEBPZQ03701 1054 aaKnown RBP15.12■□□□□ 0.01
CPEB1-212ENST00000616959 SEPT2Q15019 361 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 SLC35G1Q2M3R5 365 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 SHISA4Q96DD7 197 aa15.12■□□□□ 0.01
CPEB1-212ENST00000616959 GREB1LQ9C091 1923 aaPredicted RBP15.12■□□□□ 0.01
CPEB1-212ENST00000616959 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
CPEB1-212ENST00000616959 KIF23Q02241 960 aaPredicted RBP15.11■□□□□ 0.01
CPEB1-212ENST00000616959 RASA3Q14644 834 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 FAM83AQ86UY5 434 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 GPT2Q8TD30 523 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 HACL1Q9UJ83 578 aa15.11■□□□□ 0.01
CPEB1-212ENST00000616959 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
CPEB1-212ENST00000616959 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
CPEB1-212ENST00000616959 RAD21O60216 631 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 DDNO94850 711 aaPredicted RBP15.1■□□□□ 0.01
CPEB1-212ENST00000616959 GH2P01242 217 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 GPC2Q8N158 579 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 MAP3K14Q99558 947 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 HERC5Q9UII4 1024 aaKnown RBP15.1■□□□□ 0.01
CPEB1-212ENST00000616959 KLRF2D3W0D1 207 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 H7C1D1 291 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 PARP1P09874 1014 aaKnown RBP15.1■□□□□ 0.01
CPEB1-212ENST00000616959 PDHBP11177 359 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 EEF2P13639 858 aaKnown RBP15.1■□□□□ 0.01
CPEB1-212ENST00000616959 EPS15P42566 896 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 GPRC5DQ9NZD1 345 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 PGAP2Q9UHJ9 254 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 MYH15Q9Y2K3 1946 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 MYH4Q9Y623 1939 aa15.1■□□□□ 0.01
CPEB1-212ENST00000616959 CYTH3O43739 400 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 MMP14P50281 582 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 ICA1Q05084 483 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 GNL2Q13823 731 aaKnown RBP15.09■□□□□ 0.01
CPEB1-212ENST00000616959 C9orf131Q5VYM1 1079 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 TMEM87AQ8NBN3 555 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.09■□□□□ 0.01
CPEB1-212ENST00000616959 MMP1P03956 469 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 TNNI2P48788 182 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 SKOR2Q2VWA4 1001 aaPredicted RBP15.09■□□□□ 0.01
CPEB1-212ENST00000616959 SIAH1Q8IUQ4 282 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 UBA5Q9GZZ9 404 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
CPEB1-212ENST00000616959 BTBD18B2RXH4 712 aa15.08■□□□□ 0
CPEB1-212ENST00000616959 GNAQP50148 359 aa15.08■□□□□ 0
CPEB1-212ENST00000616959 KLHL40Q2TBA0 621 aa15.08■□□□□ 0
CPEB1-212ENST00000616959 LEO1Q8WVC0 666 aaPredicted RBP15.08■□□□□ 0
CPEB1-212ENST00000616959 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 08e-6■■■□□ 18.6
CPEB1-212ENST00000616959 SPATA32Q96LK8 384 aa15.08■□□□□ 0
CPEB1-212ENST00000616959 GPCPD1Q9NPB8 672 aa15.08■□□□□ 0
CPEB1-212ENST00000616959 SCG2P13521 617 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 TNFAIP1Q13829 316 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
CPEB1-212ENST00000616959 ANGEL2Q5VTE6 544 aaKnown RBP15.07■□□□□ 0
CPEB1-212ENST00000616959 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
CPEB1-212ENST00000616959 OXER1Q8TDS5 423 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 TEPSINQ96N21 525 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 VAT1LQ9HCJ6 419 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 CABP5Q9NP86 173 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 RBM27Q9P2N5 1060 aaKnown RBP15.07■□□□□ 0
CPEB1-212ENST00000616959 ISY1Q9ULR0 285 aaKnown RBP15.07■□□□□ 0
CPEB1-212ENST00000616959 NR5A1Q13285 461 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 GPR162Q16538 588 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 PRAMEF18Q5VWM3 479 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 BRAPQ7Z569 592 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 HOMER1Q86YM7 354 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 SCAND2PQ9GZW5 306 aaPredicted RBP15.07■□□□□ 0
CPEB1-212ENST00000616959 DEFB129Q9H1M3 183 aa15.07■□□□□ 0
CPEB1-212ENST00000616959 SNHG28P0DPA3 235 aa15.06■□□□□ 0
CPEB1-212ENST00000616959 HIRAP54198 1017 aaPredicted RBP15.06■□□□□ 0
CPEB1-212ENST00000616959 SAFBQ15424 915 aaKnown RBP eCLIP15.06■□□□□ 0
CPEB1-212ENST00000616959 CSPP1Q1MSJ5 1256 aa15.06■□□□□ 0
CPEB1-212ENST00000616959 CCDC96Q2M329 555 aa15.06■□□□□ 0
CPEB1-212ENST00000616959 MYSM1Q5VVJ2 828 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms