RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CABP7Q86V35 215 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 SGMS1Q86VZ5 419 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 ENAHQ8N8S7 591 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 TERF1P54274 439 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 ADKP55263 362 aaKnown RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 DCP1AQ9NPI6 582 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 PDE6BP35913 854 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 TBC1D8BQ0IIM8 1120 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 TRAF1Q13077 416 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 FMR1NBQ8N0W7 255 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 CSGALNACT2Q8N6G5 542 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 LINC00116Q8NCU8 138 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 COL5A2P05997 1499 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 NMT2O60551 498 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 SPECC1LQ69YQ0 1117 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 FCHSD1Q86WN1 690 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 KIAA1524Q8TCG1 905 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 FDPSP14324 419 aaKnown RBP14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 CDC25AP30304 524 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 PTPN21Q16825 1174 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 TMEM132AQ24JP5 1023 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 NELFBQ8WX92 580 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 TAF4BQ92750 862 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 CCDC102AQ96A19 550 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 SENP2Q9HC62 589 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 SF3B3Q15393 1217 aaKnown RBP14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 AXDND1Q5T1B0 1012 aaPredicted RBP14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 DYMQ7RTS9 669 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 IGDCC4Q8TDY8 1250 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 SNX29Q8TEQ0 813 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 JADE2Q9NQC1 790 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 AKAP12Q02952 1782 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 CALCRLQ16602 461 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 ZNF569Q5MCW4 686 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 GUCA1BQ9UMX6 200 aa14.84□□□□□ -0.03
PPP4R3B-206ENST00000616407 PNPLA7Q6ZV29 1317 aa14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 PPEF1O14829 653 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 ARHGAP6O43182 974 aa14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 FAM193AP78312 1265 aa14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 OXER1Q8TDS5 423 aa14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 SH3RF3Q8TEJ3 882 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 EPB41L4AQ9HCS5 686 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.03
PPP4R3B-206ENST00000616407 CTR9Q6PD62 1173 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 EPSTI1Q96J88 318 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 TECP42680 631 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 SKIDA1Q1XH10 827 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 SRPRBQ9Y5M8 271 aaKnown RBP14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 DLG5Q8TDM6 1919 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 GUCY1A2P33402 732 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 VPS36Q86VN1 386 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 SYCP3Q8IZU3 236 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 CCDC42Q96M95 316 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 STK32BQ9NY57 414 aa14.83□□□□□ -0.04
PPP4R3B-206ENST00000616407 SPATA31A5Q5VU36 1347 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 SPATA31A7Q8IWB4 1347 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 NFIXQ14938 502 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 SPAG5Q96R06 1193 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 NOC4LQ9BVI4 516 aaKnown RBP14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 GBP3Q9H0R5 595 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 ERCC3P19447 782 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 KRT9P35527 623 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 ST3GAL1Q11201 340 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 ODF2Q5BJF6 829 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 USP17L2Q6R6M4 530 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 DRC1Q96MC2 740 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 TRAF5O00463 557 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 COBLO75128 1261 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 PAFAH1B1P43034 410 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 USH1GQ495M9 461 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 CNNM4Q6P4Q7 775 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 SMYD4Q8IYR2 804 aaPredicted RBP14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 SLC44A5Q8NCS7 719 aa14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 GTPBP4Q9BZE4 634 aaKnown RBP14.82□□□□□ -0.04
PPP4R3B-206ENST00000616407 IKBKBO14920 756 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 ATP1A3P13637 1013 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 ARID5AQ03989 594 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 NEK8Q86SG6 692 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 C2CD5Q86YS7 1000 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 AK9Q5TCS8 1911 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 STK36Q9NRP7 1315 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 CTAGE9A4FU28 777 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 PTPREP23469 700 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 PCDHA4Q9UN74 947 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 NFAT5O94916 1531 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 POLR3GO15318 223 aaPredicted RBP14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 DGKHQ86XP1 1220 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 LARGE2Q8N3Y3 721 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 CD209Q9NNX6 404 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 MAN1B1Q9UKM7 699 aa14.81□□□□□ -0.04
PPP4R3B-206ENST00000616407 OR52Z1P0C646 297 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 SLFN14P0C7P3 912 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 GALNT17Q6IS24 598 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms