RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SWAP70Q9UH65 585 aa25.09■■□□□ 1.61
TRAPPC3-208ENST00000616074 ZMYND8Q9ULU4 1186 aaPredicted RBP25.09■■□□□ 1.61
TRAPPC3-208ENST00000616074 A0A1W2PPC1 479 aa25.08■■□□□ 1.61
TRAPPC3-208ENST00000616074 SLC15A5A6NIM6 579 aa25.08■■□□□ 1.61
TRAPPC3-208ENST00000616074 TMEM179Q6ZVK1 233 aa25.08■■□□□ 1.61
TRAPPC3-208ENST00000616074 GRB14Q14449 540 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 KIAA1755Q5JYT7 1200 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 C20orf194Q5TEA3 1177 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 CLEC10AQ8IUN9 316 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 ATP8A2Q9NTI2 1148 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 IVNS1ABPQ9Y6Y0 642 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 PARP14Q460N5 1801 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 ZNF236Q9UL36 1845 aa25.07■■□□□ 1.6
TRAPPC3-208ENST00000616074 SMIM22K7EJ46 135 aa25.06■■□□□ 1.6
TRAPPC3-208ENST00000616074 AKR1B1P15121 316 aa25.06■■□□□ 1.6
TRAPPC3-208ENST00000616074 GDF15Q99988 308 aa25.06■■□□□ 1.6
TRAPPC3-208ENST00000616074 TANGO6Q9C0B7 1094 aa25.06■■□□□ 1.6
TRAPPC3-208ENST00000616074 CYP2D7A0A087X1C5 515 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 HOXC6P09630 235 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 COL6A1P12109 1028 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 COG2Q14746 738 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 MFSD14CQ5VZR4 134 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 NPLOC4Q8TAT6 608 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 DNAH12Q6ZR08 3092 aa25.05■■□□□ 1.6
TRAPPC3-208ENST00000616074 SOX1O00570 391 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 SMARCA5O60264 1052 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 SYN1P17600 705 aa25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 UBE3CQ15386 1083 aa25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 C12orf60Q5U649 245 aa25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 SIAH1Q8IUQ4 282 aa25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 MOV10L1Q9BXT6 1211 aaKnown RBP25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 LRRCC1Q9C099 1032 aa25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 HOXC10Q9NYD6 342 aa25.04■■□□□ 1.6
TRAPPC3-208ENST00000616074 ICA1Q05084 483 aa25.03■■□□□ 1.6
TRAPPC3-208ENST00000616074 ARHGEF10LQ9HCE6 1279 aa25.03■■□□□ 1.6
TRAPPC3-208ENST00000616074 USP17L12C9JPN9 530 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 USP17L21D6R901 530 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 BMP8BP34820 402 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 CDK8P49336 464 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 ATP2B2Q01814 1243 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 SPICE1Q8N0Z3 855 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 LPAR1Q92633 364 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 SPATC1LQ9H0A9 340 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 TMX2Q9Y320 296 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 SLC4A4Q9Y6R1 1079 aa25.02■■□□□ 1.6
TRAPPC3-208ENST00000616074 COL11A1P12107 1806 aaPredicted RBP25.01■■□□□ 1.59
TRAPPC3-208ENST00000616074 DSG3P32926 999 aa25.01■■□□□ 1.59
TRAPPC3-208ENST00000616074 CYP2C19P33261 490 aa25.01■■□□□ 1.59
TRAPPC3-208ENST00000616074 C16orf86Q6ZW13 317 aa25.01■■□□□ 1.59
TRAPPC3-208ENST00000616074 AMOTL1Q8IY63 956 aa25.01■■□□□ 1.59
TRAPPC3-208ENST00000616074 PUS7LQ9H0K6 701 aaKnown RBP25.01■■□□□ 1.59
TRAPPC3-208ENST00000616074 IGHA2P01877 340 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 ERCC3P19447 782 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 ADORA2AP29274 412 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 LRRC26Q2I0M4 334 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 ZSCAN25Q6NSZ9 544 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 SHCBP1Q8NEM2 672 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 LRCH3Q96II8 777 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 CCDC17Q96LX7 622 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 SH2D4AQ9H788 454 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 VCPKMTQ9H867 229 aa25■■□□□ 1.59
TRAPPC3-208ENST00000616074 DDX20Q9UHI6 824 aaKnown RBP25■■□□□ 1.59
TRAPPC3-208ENST00000616074 FLOT1O75955 427 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 CNGA1P29973 690 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 MAGEA10P43363 369 aaPredicted RBP24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 DPP9Q86TI2 863 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 MB21D1Q8N884 522 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 TRPV1Q8NER1 839 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 ATG4CQ96DT6 458 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 DDRGK1Q96HY6 314 aa24.99■■□□□ 1.59
TRAPPC3-208ENST00000616074 GREB1LQ9C091 1923 aaPredicted RBP24.98■■□□□ 1.59
TRAPPC3-208ENST00000616074 STRNO43815 780 aa24.98■■□□□ 1.59
TRAPPC3-208ENST00000616074 PLS1Q14651 629 aa24.98■■□□□ 1.59
TRAPPC3-208ENST00000616074 CTR9Q6PD62 1173 aa24.98■■□□□ 1.59
TRAPPC3-208ENST00000616074 WDR46O15213 610 aaKnown RBP24.97■■□□□ 1.59
TRAPPC3-208ENST00000616074 MSCO60682 206 aa24.97■■□□□ 1.59
TRAPPC3-208ENST00000616074 CYBAP13498 195 aa24.97■■□□□ 1.59
TRAPPC3-208ENST00000616074 ECHDC1Q9NTX5 307 aa24.97■■□□□ 1.59
TRAPPC3-208ENST00000616074 ZNFX1Q9P2E3 1918 aaKnown RBP24.96■■□□□ 1.59
TRAPPC3-208ENST00000616074 COBLO75128 1261 aa24.96■■□□□ 1.59
TRAPPC3-208ENST00000616074 EEF2P13639 858 aaKnown RBP24.96■■□□□ 1.59
TRAPPC3-208ENST00000616074 OLFML2BQ68BL8 750 aa24.96■■□□□ 1.59
TRAPPC3-208ENST00000616074 SAMD1Q6SPF0 538 aaPredicted RBP24.96■■□□□ 1.59
TRAPPC3-208ENST00000616074 NCAPG2Q86XI2 1143 aa24.96■■□□□ 1.59
TRAPPC3-208ENST00000616074 SENP6Q9GZR1 1112 aaPredicted RBP24.95■■□□□ 1.58
TRAPPC3-208ENST00000616074 MROH8Q9H579 483 aa24.95■■□□□ 1.58
TRAPPC3-208ENST00000616074 KANSL2Q9H9L4 492 aa24.95■■□□□ 1.58
TRAPPC3-208ENST00000616074 ARPP21Q9UBL0 812 aaPredicted RBP24.95■■□□□ 1.58
TRAPPC3-208ENST00000616074 TMEM132BQ14DG7 1078 aa24.94■■□□□ 1.58
TRAPPC3-208ENST00000616074 TSHZ3Q63HK5 1081 aa24.94■■□□□ 1.58
TRAPPC3-208ENST00000616074 STRBPQ96SI9 672 aaKnown RBP24.94■■□□□ 1.58
TRAPPC3-208ENST00000616074 COL6A3P12111 3177 aa24.94■■□□□ 1.58
TRAPPC3-208ENST00000616074 TDHQ8IZJ6 230 aa24.93■■□□□ 1.58
TRAPPC3-208ENST00000616074 KBTBD3Q8NAB2 608 aa24.93■■□□□ 1.58
TRAPPC3-208ENST00000616074 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.93■■□□□ 1.585e-6■■■■■ 29.2
TRAPPC3-208ENST00000616074 DCTPP1Q9H773 170 aa24.93■■□□□ 1.58
TRAPPC3-208ENST00000616074 FBXO28Q9NVF7 368 aa24.93■■□□□ 1.58
TRAPPC3-208ENST00000616074 DNM1LO00429 736 aa24.92■■□□□ 1.58
TRAPPC3-208ENST00000616074 ABRAQ8N0Z2 381 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms