RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 NR5A1Q13285 461 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 RBM26Q5T8P6 1007 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 BRAPQ7Z569 592 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 CNNM3Q8NE01 707 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 TACC3Q9Y6A5 838 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 NUP98P52948 1817 aa12.16□□□□□ -0.46
PCDHGC3-202ENST00000611950 MAP2K2P36507 400 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 TRIM29Q14134 588 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZNF446Q9NWS9 450 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 PCDHA5Q9Y5H7 936 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 TCRBV5S4A2TA0A5A2 114 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 SH2B2O14492 632 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 TRIM66O15016 1216 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 NEMFO60524 1076 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 PDE8AO60658 829 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 CMA1P23946 247 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 TPM4P67936 248 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 USP49Q70CQ1 688 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 METTL16Q86W50 562 aaKnown RBP12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 AK7Q96M32 723 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 NAPBQ9H115 298 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 ETAA1Q9NY74 926 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 ZMYM6O95789 1325 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
PCDHGC3-202ENST00000611950 WTIPA6NIX2 430 aaPredicted RBP12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 GSDMDP57764 484 aa12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 GOLGA6L1Q8N7Z2 621 aa12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.47
PCDHGC3-202ENST00000611950 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 URI1O94763 535 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 FGFR2P21802 821 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 ADKP55263 362 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 TTF1Q15361 905 aaPredicted RBP12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 TRIM74Q86UV6 250 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 TRIM73Q86UV7 250 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 SLC12A7Q9Y666 1083 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 BMP6P22004 513 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 STAMQ92783 540 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 DESI2Q9BSY9 194 aa12.14□□□□□ -0.47
PCDHGC3-202ENST00000611950 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 FANCGO15287 622 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 POLR2DO15514 142 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 STX17P56962 302 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 PUM3Q15397 648 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 CCDC181Q5TID7 509 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 CPLX2Q6PUV4 134 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 ANKRD20A12PQ8NF67 263 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 STRBPQ96SI9 672 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 IL6STP40189 918 aaPredicted RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 NAP1L1P55209 391 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 MYL5Q02045 173 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 PTPAQ15257 358 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 E2F4Q16254 413 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 DIS3L2Q8IYB7 885 aaKnown RBP12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
PCDHGC3-202ENST00000611950 PRDM1O75626 825 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 BCAMP50895 628 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 ARHGAP29Q52LW3 1261 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 LPIN2Q92539 896 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 PCDHB6Q9Y5E3 794 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 AFMP43652 599 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 FMR1Q06787 632 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 KARSQ15046 597 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 SUSD4Q5VX71 490 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 OLFM4Q6UX06 510 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 AMIGO3Q86WK7 504 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 SUGP1Q8IWZ8 645 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 SMYD4Q8IYR2 804 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms