RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 CEP89Q96ST8 783 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
CDH4-202ENST00000611855 MYO6Q9UM54 1294 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
CDH4-202ENST00000611855 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 PDE6AP16499 860 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 KRT9P35527 623 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 GNGT1P63211 74 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 KRT31Q15323 416 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 GBP6Q6ZN66 633 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 GIMAP7Q8NHV1 300 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 OVOS2A0A0G2JMS6 1433 aa12.43□□□□□ -0.42
CDH4-202ENST00000611855 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
CDH4-202ENST00000611855 ARHGAP25P42331 645 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 RRAGBQ5VZM2 374 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 KCNV1Q6PIU1 500 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 MYO1BO43795 1136 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 CIAO1O76071 339 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 MAGEB6Q8N7X4 407 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 GREM2Q9H772 168 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 HPCAL4Q9UM19 191 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
CDH4-202ENST00000611855 USP8P40818 1118 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 IRAK1P51617 712 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 RILPL1Q5EBL4 403 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
CDH4-202ENST00000611855 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 FAM107BQ9H098 131 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 ABHD10Q9NUJ1 306 aa12.42□□□□□ -0.42
CDH4-202ENST00000611855 KAT6BQ8WYB5 2073 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 CDHR2Q9BYE9 1310 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 ZNF185O15231 689 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 ZEB2O60315 1214 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 ATP1A1P05023 1023 aaKnown RBP12.41□□□□□ -0.42
CDH4-202ENST00000611855 CUL4BQ13620 913 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 SHISA4Q96DD7 197 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 TMEM87BQ96K49 555 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 IQSEC3Q9UPP2 1182 aaPredicted RBP12.41□□□□□ -0.42
CDH4-202ENST00000611855 SRPRBQ9Y5M8 271 aaKnown RBP12.41□□□□□ -0.42
CDH4-202ENST00000611855 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 CPP00450 1065 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 MYBL2P10244 700 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 CNGA4Q8IV77 575 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 IFNL3Q8IZI9 196 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
CDH4-202ENST00000611855 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 KIAA0754O94854 1291 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 SCP2P22307 547 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 ERCC5P28715 1186 aaPredicted RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 WTAPQ15007 396 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 WHAMMP3Q1A5X7 153 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 RNF187Q5TA31 235 aaPredicted RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 STRBPQ96SI9 672 aaKnown RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 CAPS2Q9BXY5 557 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 TRIM49BA6NDI0 452 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 PRPF6O94906 941 aaKnown RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 IFNAR1P17181 557 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 ITGA6P23229 1130 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 PBX1P40424 430 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 MATR3P43243 847 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDH4-202ENST00000611855 ATP1A2P50993 1020 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 UBXN1Q04323 297 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 PSMB7Q99436 277 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 DONSONQ9NYP3 566 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 OTUD6BQ8N6M0 293 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 PLIN2Q99541 437 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 GDAQ9Y2T3 454 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 REXO2Q9Y3B8 237 aaKnown RBP12.4□□□□□ -0.42
CDH4-202ENST00000611855 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
CDH4-202ENST00000611855 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDH4-202ENST00000611855 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 CDKAL1Q5VV42 579 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDH4-202ENST00000611855 NAA15Q9BXJ9 866 aaKnown RBP12.39□□□□□ -0.43
CDH4-202ENST00000611855 FRMD3A2A2Y4 597 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
CDH4-202ENST00000611855 PPP2R5AQ15172 486 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDH4-202ENST00000611855 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
CDH4-202ENST00000611855 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 GNL3LQ9NVN8 582 aaKnown RBP12.39□□□□□ -0.43
CDH4-202ENST00000611855 DUSP10Q9Y6W6 482 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 MACROD2A1Z1Q3 448 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 COPB1P53618 953 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms