RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 MSCO60682 206 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 SYN1P17600 705 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 LRRC26Q2I0M4 334 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 LRIT3Q3SXY7 679 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 WDR78Q5VTH9 848 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 SHCBP1Q8NEM2 672 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 NPLOC4Q8TAT6 608 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 HAUS7Q99871 368 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 MOV10L1Q9BXT6 1211 aaKnown RBP16.8■□□□□ 0.28
MUC1-222ENST00000610468 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 PAG1Q9NWQ8 432 aa16.8■□□□□ 0.28
MUC1-222ENST00000610468 DDX20Q9UHI6 824 aaKnown RBP16.8■□□□□ 0.28
MUC1-222ENST00000610468 MPHOSPH10O00566 681 aaKnown RBP16.79■□□□□ 0.28
MUC1-222ENST00000610468 STRNO43815 780 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 MBD4O95243 580 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 MB21D1Q8N884 522 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 SPATC1LQ9H0A9 340 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 TMX2Q9Y320 296 aa16.79■□□□□ 0.28
MUC1-222ENST00000610468 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 PRKAB2O43741 272 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 CYBAP13498 195 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 ATP2B2Q01814 1243 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 UBE3CQ15386 1083 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 SLFNL1Q499Z3 407 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 OLFML2BQ68BL8 750 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 TDHQ8IZJ6 230 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 TRPV1Q8NER1 839 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 CCDC17Q96LX7 622 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.28
MUC1-222ENST00000610468 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 CHMP4BQ9H444 224 aaKnown RBP16.78■□□□□ 0.28
MUC1-222ENST00000610468 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
MUC1-222ENST00000610468 AKR1B1P15121 316 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 ERCC3P19447 782 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 ADORA2AP29274 412 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 CYP2C19P33261 490 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 ICA1Q05084 483 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 C12orf60Q5U649 245 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 ABRAQ8N0Z2 381 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 SH2D4AQ9H788 454 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 VCPKMTQ9H867 229 aa16.77■□□□□ 0.28
MUC1-222ENST00000610468 COL6A3P12111 3177 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 SMIM22K7EJ46 135 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 DNM1LO00429 736 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 DSG3P32926 999 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 C16orf86Q6ZW13 317 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 CLEC10AQ8IUN9 316 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 UBE2OQ9C0C9 1292 aaKnown RBP16.76■□□□□ 0.27
MUC1-222ENST00000610468 MROH8Q9H579 483 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 ARHGEF10LQ9HCE6 1279 aa16.76■□□□□ 0.27
MUC1-222ENST00000610468 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 USP17L21D6R901 530 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
MUC1-222ENST00000610468 COBLO75128 1261 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 FLOT1O75955 427 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 CHGBP05060 677 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 CDK8P49336 464 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
MUC1-222ENST00000610468 CYP2D7A0A087X1C5 515 aa16.74■□□□□ 0.27
MUC1-222ENST00000610468 SPICE1Q8N0Z3 855 aa16.74■□□□□ 0.27
MUC1-222ENST00000610468 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
MUC1-222ENST00000610468 SENP6Q9GZR1 1112 aaPredicted RBP16.74■□□□□ 0.27
MUC1-222ENST00000610468 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
MUC1-222ENST00000610468 RLFQ13129 1914 aa16.74■□□□□ 0.27
MUC1-222ENST00000610468 SEPT4O43236 478 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 CNGA1P29973 690 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 CTR9Q6PD62 1173 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 AMOTL1Q8IY63 956 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 SLC5A4Q9NY91 659 aa16.73■□□□□ 0.27
MUC1-222ENST00000610468 DNAH12Q6ZR08 3092 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 EEF2P13639 858 aaKnown RBP16.72■□□□□ 0.27
MUC1-222ENST00000610468 TMEM132BQ14DG7 1078 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 ZSCAN25Q6NSZ9 544 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 DEFB123Q8N688 67 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
MUC1-222ENST00000610468 PUS7LQ9H0K6 701 aaKnown RBP16.72■□□□□ 0.27
MUC1-222ENST00000610468 BCL11AQ9H165 835 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 FRMPD3Q5JV73 1810 aa16.72■□□□□ 0.27
MUC1-222ENST00000610468 SLC25A27O95847 323 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 FCER1AP12319 257 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 NCAPG2Q86XI2 1143 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 ARRDC4Q8NCT1 418 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 MAML3Q96JK9 1138 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
MUC1-222ENST00000610468 ARPP21Q9UBL0 812 aaPredicted RBP16.71■□□□□ 0.27
MUC1-222ENST00000610468 NRBP1Q9UHY1 535 aa16.71■□□□□ 0.27
MUC1-222ENST00000610468 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
MUC1-222ENST00000610468 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
MUC1-222ENST00000610468 RTP1P59025 263 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms