RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PRELPP51888 382 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CACNB3P54284 484 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PKN1Q16512 942 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PFKFB3Q16875 520 aaPredicted RBP14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 GPATCH4Q5T3I0 446 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 USP48Q86UV5 1035 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 FERMT3Q86UX7 667 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SRBD1Q8N5C6 995 aaKnown RBP14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 HOOK2Q96ED9 719 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 POLR3EQ9NVU0 708 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PGAP2Q9UHJ9 254 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.13
NEDD8-MDP1-203ENST00000604306 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 SCG2P13521 617 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ABCB5Q2M3G0 1257 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PHF20Q9BVI0 1012 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 BRMS1Q9HCU9 246 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ZNF541Q9H0D2 1346 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 H7C1D1 291 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PDHBP11177 359 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CALML3P27482 149 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RBM26Q5T8P6 1007 aaKnown RBP14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 MYSM1Q5VVJ2 828 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 APOBEC3FQ8IUX4 373 aaKnown RBP14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CCDC148Q8NFR7 591 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 DCAF4Q8WV16 495 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 SPATA32Q96LK8 384 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CABP5Q9NP86 173 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CNOT7Q9UIV1 285 aaKnown RBP14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RCOR1Q9UKL0 485 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 POLR2AP24928 1970 aaKnown RBP14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PAPPA2Q9BXP8 1791 aa14.19□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PITPNM2Q9BZ72 1349 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CLRN2A0PK11 232 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 TCP10L2B9ZVM9 353 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 KLRF2D3W0D1 207 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 FIBPO43427 364 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 KIF4BQ2VIQ3 1234 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 TEX2Q8IWB9 1127 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 DAGLBQ8NCG7 672 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 KCNG4Q8TDN1 519 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RIOX1Q9H6W3 641 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GPRC5DQ9NZD1 345 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 V9GY48 417 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GUCY1A2P33402 732 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ICA1Q05084 483 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ZNF543Q08ER8 600 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GNL2Q13823 731 aaKnown RBP14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 NBPF9Q3BBW0 867 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RILPL1Q5EBL4 403 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 AIFM3Q96NN9 605 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 SH2D4AQ9H788 454 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PARP14Q460N5 1801 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ESYT2A0FGR8 921 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 MPHOSPH10O00566 681 aaKnown RBP14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 BMP15O95972 392 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 KRT2P35908 639 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 TRAPPC10P48553 1259 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GUCY1B3Q02153 619 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GSE1Q14687 1217 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 PPP1R18Q6NYC8 613 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 DIS3L2Q8IYB7 885 aaKnown RBP14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 STAG2Q8N3U4 1231 aa14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 KIF28PB7ZC32 967 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 DTNBO60941 627 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ASNSP08243 561 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RASA3Q14644 834 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 DCAF15Q66K64 600 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 JMYQ8N9B5 988 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 MTMR8Q96EF0 704 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 TEPSINQ96N21 525 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 USP28Q96RU2 1077 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 GJA3Q9Y6H8 435 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
NEDD8-MDP1-203ENST00000604306 RBBP6Q7Z6E9 1792 aaKnown RBP14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 A0A1W2PQ27 194 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 A0A1W2PQ64 194 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 A0A1W2PQD8 194 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms