RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 MAD2L2Q9UI95 211 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 GOLGA6L4A6NEF3 574 aa25.73■■□□□ 1.71
PPFIA3-211ENST00000602848 PRELPP51888 382 aa25.73■■□□□ 1.71
PPFIA3-211ENST00000602848 ZNF445P59923 1031 aa25.73■■□□□ 1.71
PPFIA3-211ENST00000602848 ARHGAP27Q6ZUM4 889 aa25.73■■□□□ 1.71
PPFIA3-211ENST00000602848 HERC5Q9UII4 1024 aaKnown RBP25.73■■□□□ 1.71
PPFIA3-211ENST00000602848 MYH6P13533 1939 aa25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 YEATS4O95619 227 aa25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 EIF6P56537 245 aaKnown RBP25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 FAM83AQ86UY5 434 aa25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 DPF2Q92785 391 aa25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 USP28Q96RU2 1077 aa25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 SH3GLB2Q9NR46 395 aa25.72■■□□□ 1.71
PPFIA3-211ENST00000602848 KIF28PB7ZC32 967 aa25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 FZD9O00144 591 aa25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 ZNF280AP59817 542 aaPredicted RBP25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 RASSF7Q02833 373 aa25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 PFKFB3Q16875 520 aaPredicted RBP25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 CERKLQ49MI3 558 aaPredicted RBP25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 SPZ1Q9BXG8 430 aa25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 GREB1LQ9C091 1923 aaPredicted RBP25.71■■□□□ 1.71
PPFIA3-211ENST00000602848 LETM1O95202 739 aaPredicted RBP25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 PARP1P09874 1014 aaKnown RBP25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 SCG2P13521 617 aa25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 NASPP49321 788 aaPredicted RBP25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 ZSCAN23Q3MJ62 389 aa25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 DNAJC18Q9H819 358 aa25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 SIPA1L1O43166 1804 aa25.7■■□□□ 1.71
PPFIA3-211ENST00000602848 DEKP35659 375 aaKnown RBP25.7■■□□□ 1.7
PPFIA3-211ENST00000602848 NOSTRINQ8IVI9 506 aa25.7■■□□□ 1.7
PPFIA3-211ENST00000602848 PHF20Q9BVI0 1012 aa25.7■■□□□ 1.7
PPFIA3-211ENST00000602848 KANSL2Q9H9L4 492 aa25.7■■□□□ 1.7
PPFIA3-211ENST00000602848 TMEM63CQ9P1W3 806 aa25.7■■□□□ 1.7
PPFIA3-211ENST00000602848 UBE2Q2LH0YL09 131 aa25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 ASPRV1Q53RT3 343 aa25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 DIS3L2Q8IYB7 885 aaKnown RBP25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 KCNG4Q8TDN1 519 aa25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 BRMS1Q9HCU9 246 aa25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 MYOZ2Q9NPC6 264 aa25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 NYAP2Q9P242 653 aa25.69■■□□□ 1.7
PPFIA3-211ENST00000602848 DCAF8L1A6NGE4 600 aa25.68■■□□□ 1.7
PPFIA3-211ENST00000602848 KLRF2D3W0D1 207 aa25.68■■□□□ 1.7
PPFIA3-211ENST00000602848 TMEM179Q6ZVK1 233 aa25.68■■□□□ 1.7
PPFIA3-211ENST00000602848 MKL1Q969V6 931 aa25.68■■□□□ 1.7
PPFIA3-211ENST00000602848 CSRNP1Q96S65 589 aa25.68■■□□□ 1.7
PPFIA3-211ENST00000602848 CLIP2Q9UDT6 1046 aa25.68■■□□□ 1.7
PPFIA3-211ENST00000602848 FSD2A1L4K1 749 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 GOLGA6L3A6NEY3 463 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 SNHG28P0DPA3 235 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 CCDC183Q5T5S1 534 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 ANO1Q5XXA6 986 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 STAG2Q8N3U4 1231 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 LINC00301Q8NCQ3 95 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 KCNJ14Q9UNX9 436 aa25.67■■□□□ 1.7
PPFIA3-211ENST00000602848 TCP10L2B9ZVM9 353 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 MPHOSPH10O00566 681 aaKnown RBP25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 TBC1D12O60347 775 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 L1TD1Q5T7N2 865 aaKnown RBP25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 SYNPO2Q9UMS6 1093 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 BTBD18B2RXH4 712 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 CALML3P27482 149 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 KRT2P35908 639 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 TNNI2P48788 182 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 RILPL1Q5EBL4 403 aa25.66■■□□□ 1.7
PPFIA3-211ENST00000602848 DICER1Q9UPY3 1922 aaKnown RBP25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 CLRN2A0PK11 232 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 WNT10BO00744 389 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 PDHBP11177 359 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 STK38Q15208 465 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 GALNT17Q6IS24 598 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 PGBD1Q96JS3 809 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 VPS54Q9P1Q0 977 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 CNTNAP1P78357 1384 aa25.65■■□□□ 1.7
PPFIA3-211ENST00000602848 CEBPZQ03701 1054 aaKnown RBP25.64■■□□□ 1.7
PPFIA3-211ENST00000602848 SLC39A14Q15043 492 aa25.64■■□□□ 1.7
PPFIA3-211ENST00000602848 ABCB5Q2M3G0 1257 aa25.64■■□□□ 1.7
PPFIA3-211ENST00000602848 RBM26Q5T8P6 1007 aaKnown RBP25.64■■□□□ 1.7
PPFIA3-211ENST00000602848 CABP5Q9NP86 173 aa25.64■■□□□ 1.7
PPFIA3-211ENST00000602848 CLIC4Q9Y696 253 aa25.64■■□□□ 1.7
PPFIA3-211ENST00000602848 GPATCH4Q5T3I0 446 aaKnown RBP25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 ADALQ6DHV7 355 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 JMYQ8N9B5 988 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 A0A1W2PQ27 194 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 A0A1W2PQ64 194 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 A0A1W2PQD8 194 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 hCG_1984214I3L0E3 225 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 SPTLC2O15270 562 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 TNFAIP1Q13829 316 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 SF3A1Q15459 793 aaKnown RBP25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 ZNF713Q8N859 430 aaPredicted RBP25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 CCDC148Q8NFR7 591 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 RRP36Q96EU6 259 aaKnown RBP25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 RIOX1Q9H6W3 641 aa25.63■■□□□ 1.69
PPFIA3-211ENST00000602848 USP17L5A8MUK1 530 aa25.62■■□□□ 1.69
PPFIA3-211ENST00000602848 CYTH3O43739 400 aa25.62■■□□□ 1.69
PPFIA3-211ENST00000602848 PPP6R2O75170 966 aa25.62■■□□□ 1.69
PPFIA3-211ENST00000602848 LMNB1P20700 586 aa25.62■■□□□ 1.69
PPFIA3-211ENST00000602848 ME1P48163 572 aa25.62■■□□□ 1.69
PPFIA3-211ENST00000602848 GMPSP49915 693 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms